Pairwise Alignments

Query, 541 a.a., methyl-accepting chemotaxis sensory transducer from Marinobacter adhaerens HP15

Subject, 528 a.a., PAS domain S-box from Pseudomonas stutzeri RCH2

 Score =  207 bits (526), Expect = 1e-57
 Identities = 128/354 (36%), Positives = 199/354 (56%), Gaps = 11/354 (3%)

Query: 190 LVAGLLIA----AIILGTIALIMILLSGV----VRPAQKLTSQISRLGDGDLSDPVTMQR 241
           +VAG L+     AI L T A   +   G+    + P Q+L  Q  ++GD  +   +   R
Sbjct: 165 VVAGGLLGGAGVAIALATAAAAALGAGGLAYLALAPLQQLAEQARQVGDNPVGQLIYAGR 224

Query: 242 ADELGQLADAARSLHRFLSDTGSQLSENARQLNDTGELIRQNADSVVSQSDLAHQRIEQI 301
            DE GQ+A A + L         ++ + +RQL+     +    DS    +       +Q+
Sbjct: 225 RDEYGQIAFAMKMLETEAGAMVGRIGDASRQLSQHAHELLGAMDSSTQSASRQQSETDQV 284

Query: 302 ATAMNEMSATAEDVASHAASVATEVSQTSDETATADSQINKAVDSMRRLTDQIRNSAETV 361
           ATA+N+M+A+ ++VA++A   A   S+   ETAT    +N+   ++ +L   I+ + + +
Sbjct: 285 ATAINQMAASVQEVANNAQRTAEAASRADSETATGTEVVNRTGAAIGQLAQDIQQAGDVI 344

Query: 362 NQLANDGKKVGDVMQVIREIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRNLAAKTQ 421
           ++L      +  V+ VIR IA+QTNLLALNAAIEAARAG+ GRGFAVVADEVRNLA++TQ
Sbjct: 345 HELEAHSNDITKVLDVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLASRTQ 404

Query: 422 EATVEIDQIIGAISGASRDATEFMQASGVVAQESSEAVEAVRATLAEINRRMGSINDATT 481
           ++T EI+ +IGA+ G +R A E MQ S   A +S E       +L  IN R+  I++ + 
Sbjct: 405 QSTQEINGMIGALQGGARQAVEVMQRSREQAMQSVEHAAQAARSLHGINSRVTEISEMSQ 464

Query: 482 QVATAAEEQTSVCEDINRNVTDVAETSEAMHQAAENNLRTVPELEAMAARAQEL 535
           Q+A A E+Q++V E+IN+N+  +   S+  H  A N LR+      +A  A  +
Sbjct: 465 QIAAAVEQQSAVSENINQNIVSIRGGSD--HHVA-NGLRSRQSASGVAELANSM 515