Pairwise Alignments

Query, 541 a.a., methyl-accepting chemotaxis sensory transducer from Marinobacter adhaerens HP15

Subject, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  199 bits (505), Expect = 3e-55
 Identities = 120/333 (36%), Positives = 187/333 (56%), Gaps = 8/333 (2%)

Query: 187 RSWLVAGLLIAAIILGTIALIMILLSGVVRPAQKLTSQISRLGDGDLSDPVTMQRADELG 246
           + +L  G     + L  I L +++   V++P   +   + ++  GDL+  + +   DELG
Sbjct: 182 QQFLRMGFATLIVTLVMIGLGVVISRAVIQPLDTIKDVMKKVAQGDLTAQIPVLGKDELG 241

Query: 247 QLA----DAARSLHRFLSDTGSQLSENARQLNDTGELIRQNADSVVSQSDLAHQRIEQIA 302
            +A    ++  ++H  L ++    S  A           + + +VVSQ D    ++ Q+A
Sbjct: 242 IVAQRINNSIAAVHDALVESVQSASSVAEAAIRIASSAEETSQAVVSQRD----QLSQLA 297

Query: 303 TAMNEMSATAEDVASHAASVATEVSQTSDETATADSQINKAVDSMRRLTDQIRNSAETVN 362
           TAMN+M+AT  DVA HA   A +    S E    D  ++ +VDS+R L+ ++  + + VN
Sbjct: 298 TAMNQMTATVADVAGHAEDTARDTLDASKEANLGDKDVHSSVDSIRALSVELGVATDQVN 357

Query: 363 QLANDGKKVGDVMQVIREIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRNLAAKTQE 422
           +L     ++ +V  VI  I++QTNLLALNAAIEAARAGD GRGFAVVADEVRNLA++T  
Sbjct: 358 KLKEGVMQISEVTSVISGISEQTNLLALNAAIEAARAGDQGRGFAVVADEVRNLASRTHH 417

Query: 423 ATVEIDQIIGAISGASRDATEFMQASGVVAQESSEAVEAVRATLAEINRRMGSINDATTQ 482
           +T EI  +I  +   +      MQ S  +A  S    E   + L+ I   +  ++D  TQ
Sbjct: 418 STDEIQTMINRLQQLAVSTASAMQKSQALAANSVATAENAGSDLSLIVNHIQHVSDKATQ 477

Query: 483 VATAAEEQTSVCEDINRNVTDVAETSEAMHQAA 515
           +ATAAEEQ++V E++NRNV+ + + +  M QAA
Sbjct: 478 IATAAEEQSAVAEEMNRNVSGINDAALEMSQAA 510



 Score = 30.0 bits (66), Expect = 2e-04
 Identities = 21/89 (23%), Positives = 39/89 (43%), Gaps = 17/89 (19%)

Query: 449 GVVAQESSEAVEAVRATLAEINRRMGSINDATTQVATAAEEQTSVCEDINRNVTDVAETS 508
           G+VAQ  + ++ AV   L E  +   S+ +A  ++A++AEE                 TS
Sbjct: 241 GIVAQRINNSIAAVHDALVESVQSASSVAEAAIRIASSAEE-----------------TS 283

Query: 509 EAMHQAAENNLRTVPELEAMAARAQELAG 537
           +A+    +   +    +  M A   ++AG
Sbjct: 284 QAVVSQRDQLSQLATAMNQMTATVADVAG 312



 Score = 29.3 bits (64), Expect = 4e-04
 Identities = 18/79 (22%), Positives = 32/79 (40%)

Query: 276 TGELIRQNADSVVSQSDLAHQRIEQIATAMNEMSATAEDVASHAASVATEVSQTSDETAT 335
           T E    +   +V+       +  QIATA  E SA AE++  + + +     + S     
Sbjct: 453 TAENAGSDLSLIVNHIQHVSDKATQIATAAEEQSAVAEEMNRNVSGINDAALEMSQAATY 512

Query: 336 ADSQINKAVDSMRRLTDQI 354
              +  K  D  R+L  ++
Sbjct: 513 LAEESEKLADLSRQLDQKL 531