Pairwise Alignments

Query, 541 a.a., methyl-accepting chemotaxis sensory transducer from Marinobacter adhaerens HP15

Subject, 642 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  208 bits (530), Expect = 4e-58
 Identities = 123/353 (34%), Positives = 193/353 (54%), Gaps = 5/353 (1%)

Query: 190 LVAGLLIAAIILGTIALIMILLSGVVRPAQKLTSQISRLGDG--DLSDPVTMQRADELGQ 247
           L+  L+IAA   G I L +++   V RP  ++ +    +G+G  DL   + +   DE+ Q
Sbjct: 292 LIWTLIIAA---GFIMLAIVVAGSVSRPIAQVAAMFRDIGEGEGDLRQRLPVNGKDEIAQ 348

Query: 248 LADAARSLHRFLSDTGSQLSENARQLNDTGELIRQNADSVVSQSDLAHQRIEQIATAMNE 307
           LA    S    + D+  ++++ + QL  + + +   A   +  S     R   + TA+NE
Sbjct: 349 LAQGFNSFISKIQDSVIEVAQTSEQLGLSAKDVSNQAQQTLEDSHEQKDRTMMVVTAINE 408

Query: 308 MSATAEDVASHAASVATEVSQTSDETATADSQINKAVDSMRRLTDQIRNSAETVNQLAND 367
           M AT  ++AS+AA  A        E+ +    + +A D++ +L+  +    E +  LA  
Sbjct: 409 MGATVNEIASNAAQAAVAAKDADTESNSGQVVVTRARDTINQLSHDVEQVGEVIESLATH 468

Query: 368 GKKVGDVMQVIREIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRNLAAKTQEATVEI 427
            K +G ++ VIR I++QTNLLALNAAIEAARAG+AGRGFAVVADEVRNLA++T  +T E+
Sbjct: 469 TKSIGGILDVIRAISEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLASRTAASTNEV 528

Query: 428 DQIIGAISGASRDATEFMQASGVVAQESSEAVEAVRATLAEINRRMGSINDATTQVATAA 487
             +I  +   +  A   M  S   + E   AV+    +L  I++R+G I+D   QVA A 
Sbjct: 529 QGMIDKLQSEASRAVSAMAQSRARSHEGVTAVDEASQSLVGISKRIGLISDMNIQVAAAT 588

Query: 488 EEQTSVCEDINRNVTDVAETSEAMHQAAENNLRTVPELEAMAARAQELAGRIK 540
           EEQ++V EDINRNVT++ + ++     A+   +    L  +A R   L  + K
Sbjct: 589 EEQSTVVEDINRNVTEINDITQRTASTAQAAAQASLALNQLAHRLDTLVAKFK 641