Pairwise Alignments

Query, 541 a.a., methyl-accepting chemotaxis sensory transducer from Marinobacter adhaerens HP15

Subject, 554 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  198 bits (504), Expect = 4e-55
 Identities = 125/381 (32%), Positives = 208/381 (54%), Gaps = 8/381 (2%)

Query: 163 VDAATAVREDSLDRARTLNTVVTERSWLVAGLLIAAIILGTIA-LIMILLSGVVRPAQKL 221
           +D   AV ED     +T+   + E+S ++  LLIA ++ G  A +IM+    +V P + +
Sbjct: 178 IDDIEAVVEDY---RQTVTEQMAEKSLMI--LLIALVLTGATAFVIMVAAHRMVVPIKNM 232

Query: 222 TSQISRL--GDGDLSDPVTMQRADELGQLADAARSLHRFLSDTGSQLSENARQLNDTGEL 279
              ++ +  G+GDL+  ++++  DE+ QL  A       L      ++    ++      
Sbjct: 233 ADNLNDIAKGEGDLTKRLSVKGEDEIAQLGRAFNLFVDKLQHIIGDVASATAKVKTAANA 292

Query: 280 IRQNADSVVSQSDLAHQRIEQIATAMNEMSATAEDVASHAASVATEVSQTSDETATADSQ 339
           I      + SQ    +   +Q+ TA+ EMS+TA +VA +   VA      + + A A   
Sbjct: 293 IHDQTKVMSSQLLSHNNETDQVVTAITEMSSTASEVAQNTTQVAEATQAATGDVANAQRC 352

Query: 340 INKAVDSMRRLTDQIRNSAETVNQLANDGKKVGDVMQVIREIADQTNLLALNAAIEAARA 399
           ++ +++ +  L +QI ++A ++  L+   +K+  V+ VI  IA+QTNLLALNAAIEAARA
Sbjct: 353 VDASLEEIAALMEQINHAAGSIKSLSEQSQKINSVLSVIGGIAEQTNLLALNAAIEAARA 412

Query: 400 GDAGRGFAVVADEVRNLAAKTQEATVEIDQIIGAISGASRDATEFMQASGVVAQESSEAV 459
           G+ GRGFAVVADEVR+LA++TQ +T+EI++++ A+      A + M  S      S E+ 
Sbjct: 413 GEQGRGFAVVADEVRSLASRTQASTLEINEMLSALHKLVSQAVKTMDESQQSCVRSVESS 472

Query: 460 EAVRATLAEINRRMGSINDATTQVATAAEEQTSVCEDINRNVTDVAETSEAMHQAAENNL 519
            A+  +L  +   + +IND +TQ+ATAA EQ+SV E+INRNV  + E    +  ++E+  
Sbjct: 473 RAISESLGSVTSAVTAINDMSTQIATAATEQSSVTEEINRNVYAIQEIVNELLHSSEHAA 532

Query: 520 RTVPELEAMAARAQELAGRIK 540
           R    +         L G+ K
Sbjct: 533 RVSQTVSQEGTNLGNLVGQFK 553