Pairwise Alignments

Query, 166 a.a., sigma-70 family RNA polymerase sigma factor from Pantoea sp. MT58

Subject, 181 a.a., RNA polymerase sigma factor 70 (ECF15 subgroup, ECF26 subgroup) from Phaeobacter inhibens DSM 17395

 Score = 80.5 bits (197), Expect = 1e-20
 Identities = 55/153 (35%), Positives = 78/153 (50%), Gaps = 6/153 (3%)

Query: 2   RQHLAEHLTRLWRYGYVLSHNRDMAEELVQSTCVRALERSAQFMPGTRIDRWLFSILHSI 61
           R  L +HL  +  +   L+ N  MA++LVQ T V+A     +F  G+ +  WLF+IL + 
Sbjct: 5   RDELVDHLGAMRAFAISLTRNTAMADDLVQDTLVKAWTNIEKFEEGSNMRAWLFTILRNT 64

Query: 62  WVS--DLRARKVRQGQGFVDPDALLAADNHATSDDNRHFQRIMQHVNALPEAQRNALFLV 119
           + S    R R+V    G +  + L    +H    + R F      +N   + QR AL LV
Sbjct: 65  YYSLRRKRRREVEDADGVLS-EQLSQKPDHDGRLNMRDFNTAFAQLN---DEQREALVLV 120

Query: 120 YVEGLTYQEAAETLAVPVGTIMSRLAAARATLA 152
              G +Y+EAAET  V VGTI SR+   RA LA
Sbjct: 121 GAGGFSYEEAAETCGVKVGTIKSRVNRGRARLA 153