Pairwise Alignments

Query, 414 a.a., tryptophan permease from Pantoea sp. MT58

Subject, 414 a.a., tryptophan-specific transport protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  313 bits (801), Expect = 8e-90
 Identities = 165/404 (40%), Positives = 249/404 (61%), Gaps = 3/404 (0%)

Query: 12  SVFWGATIICGTVVGAGMFVLPVVMAGAWFGWALLILTFSWVCMLISGLMFHRVSQHYPL 71
           S+  GA II GT VGAGMF LPVV +G WFG+++L+L   W CML+SGL+    + H+  
Sbjct: 12  SLLGGAMIIAGTTVGAGMFSLPVVGSGMWFGYSILMLLGIWFCMLMSGLLLLETNLHFEP 71

Query: 72  ETGYDKIVRDVLGRNWAEVNGLSLVFVLGILTYAYISAVGPVYDHSLSRLTGKTVSSSEA 131
              +D + ++ LG+ W  VNG+S+ FVL ILTYAYIS  G + +HSL  + G  +  S A
Sbjct: 72  GASFDTLTKETLGQFWRIVNGVSIAFVLYILTYAYISGGGSIVNHSLQGM-GIELPQSVA 130

Query: 132 KVMLSLTVAAIVWLGTSSIGRIMSVLLITKIVLLLILFGGLLTTVNVDYLLDSQNSAASY 191
            ++ ++ +A IV + T ++ RI +++L   I+   +  G LL  ++V  LL+   +   +
Sbjct: 131 GLVFTVVLACIVLISTKAVDRITTIMLGGMIITFFLAIGNLLIEIDVTKLLEPDGNQR-F 189

Query: 192 WPYMLGIVPFCLASFGYHGNISGLISYYNGDHRRVKICLYTGTAVALVIYLFWIICTMGN 251
            PY+   +PF LASFGYHGN+  L+ YY  D   +   ++ GT +AL+IY+ W++ TMGN
Sbjct: 190 IPYLWVALPFGLASFGYHGNVPSLVKYYGKDSSTIIKAIFVGTFIALIIYVCWLVATMGN 249

Query: 252 LPRSAFPEIASQGGDIAALMHAFSLRGYTAGMSLLFSIFSHFAVICSFVGVTAGLVDYIS 311
           +PRS F EI +QGG++  L+ A S    ++ ++ + ++F++ AV  SF+GVT GL DY++
Sbjct: 250 IPRSQFSEIIAQGGNMGVLVGALSKVMESSWLNSMLTLFANLAVASSFLGVTLGLFDYLA 309

Query: 312 DRLTLPRTRTGRLKATAITFLPPLSLSLLFPDGFVSAIGYAGLIATIWAVIVPGLLHLKM 371
           D      +R+GR+K   +TF+PP    LLFPDGF+ AIG+A L AT+WAVIVP L+  K 
Sbjct: 310 DLFGFDDSRSGRMKTAIVTFVPPTVFGLLFPDGFLIAIGFAALAATVWAVIVPALMAYKS 369

Query: 372 RSLHYSGYQRSQWDGLQLCMIMV-FAALNILSWALREFDLLPVF 414
           R L  +      + G  L +++V F  +      L   +LLP F
Sbjct: 370 RQLFPNHQGFRVFGGTPLIILVVLFGVVTGACHLLAMANLLPQF 413