Pairwise Alignments

Query, 283 a.a., sugar ABC transporter permease from Pantoea sp. MT58

Subject, 404 a.a., binding-protein-dependent transport systems inner membrane component (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  138 bits (347), Expect = 2e-37
 Identities = 84/273 (30%), Positives = 145/273 (53%), Gaps = 9/273 (3%)

Query: 17  LTWLVVLAVSTIIIYPLVWTVGASLNAGNSLLSSSI-----IPENASL-QHYRDLFNGTV 70
           LT    +  + +++ P    V  SL +  +LL + +     + +   L + Y +LF G  
Sbjct: 135 LTGFGYIFFTAVVLIPFYVMVMTSLKSQQALLQNPLDFSLDLSQGWGLFRSYAELF-GQF 193

Query: 71  PYMTWYWNSMKISFLTMVLTLISVSCTAYAFSRFRFKGRQNGLMLFLLLQMIPQFSALIA 130
            + T+ W S  +S LT+++TL      AYA +R RF GR       LL+ M+P     + 
Sbjct: 194 NFGTYLWTSFFVSVLTVLITLAFSIPGAYAVARLRFAGRAAFSRSILLIYMVPMIVLALP 253

Query: 131 IFVLSQLLGLINSHLALVLIYVGGMIPMNTYLMKGYLDSIPKDLDESARMDGAGNFRIFV 190
           I++   + GL N+   +VLIY    IP+  Y+++GY   +P +++E+  MDG    ++  
Sbjct: 254 IYIAFSVTGLRNTLFGIVLIYPVTTIPVALYMLQGYFRGLPAEVEEAGLMDGLNRLQVIW 313

Query: 191 EIIMPLSKPILAVVALFSFTGPLGDFILSSTILRTPEQFTLPIGLYNLVSQKMGASYTTY 250
           +I +PL+ P LA V+L+ F     +F+L+  +L  P +FTL  G+ +L S ++   +   
Sbjct: 314 KITLPLALPALASVSLYVFMIAWNEFLLAFMLLDDPSKFTLTRGIASLNSSEIPRQH--L 371

Query: 251 AAGAVLIAVPVAVFYLALQKYFVSGLASGSTKG 283
            AGAV+  VP+   +L L+++   GL +GS KG
Sbjct: 372 MAGAVIATVPIMAIFLGLERFMTKGLTAGSVKG 404