Pairwise Alignments

Query, 184 a.a., sigma-70 family RNA polymerase sigma factor from Pantoea sp. MT58

Subject, 191 a.a., RNA polymerase sigma factor RpoE from Azospirillum brasilense Sp245

 Score = 61.6 bits (148), Expect = 8e-15
 Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 5/167 (2%)

Query: 14  LMARAQAGDRAAYNQLLKAMVPAIRALVCKKIRDEVLVEDVIQETLLAIHRVRHTYDP-Q 72
           L A  +  DR A+  L     P ++A + ++  D    E+++Q+ +L + R   TYDP Q
Sbjct: 19  LTAVGRDRDRTAFAALFGHFAPRLKAYLRRQGCDAGGAEELVQDVMLLVWRRAETYDPTQ 78

Query: 73  RPILPWVAAIASARTIDTLRQHGRRQEVQDEEALQKRPAESSE----LQSDNDILSGYLD 128
                WV  IA  R ID LR+  R +    +  L   P ES++     +     L   L 
Sbjct: 79  ASAATWVFTIARNRRIDALRREQRPEIDPADPTLVPDPMESADDGVAARETAGRLRAALR 138

Query: 129 ILPLRQREIVESVHLREQSLAQAAAETHQSLSAVKSLLHRAMVNLRK 175
            LP  Q +++   +  ++  +  +AE    L  VKS L  AM  LRK
Sbjct: 139 TLPPEQADLLRLAYFEDKPHSLISAEQGIPLGTVKSRLRLAMERLRK 185