Pairwise Alignments

Query, 184 a.a., sigma-70 family RNA polymerase sigma factor from Pantoea sp. MT58

Subject, 178 a.a., RNA polymerase sigma factor, sigma-70 family from Sphingomonas koreensis DSMZ 15582

 Score = 74.7 bits (182), Expect = 8e-19
 Identities = 54/160 (33%), Positives = 83/160 (51%), Gaps = 6/160 (3%)

Query: 14  LMARAQAGDRAAYNQLLKAMVPAIRALVCKKIR-DEVLVEDVIQETLLAIHRVRHTYDPQ 72
           LM     GD  A+  LL  +VP +R    ++    +  +ED++QETL+A+H  R TYDP 
Sbjct: 11  LMVAGLGGDATAHAALLGVLVPLLRGFYRRRASGSDDDIEDLVQETLIAVHVRRATYDPC 70

Query: 73  RPILPWVAAIASARTIDTLRQHGRRQEVQD-EEALQKRPAES-SELQSDNDILSGYLDIL 130
           R    W+ AIA  + ID  R++ R + ++  EE L     ES +  + D D L   LD L
Sbjct: 71  RAFTAWLFAIARYKMIDHFRRNRRLRPIEGLEEVLVAEDFESVTAARIDIDDL---LDSL 127

Query: 131 PLRQREIVESVHLREQSLAQAAAETHQSLSAVKSLLHRAM 170
           P +Q  ++ +  +   S+A+AA       S VK  +HR +
Sbjct: 128 PAKQAGLIRATRIDGFSVAEAATAGGFGESDVKVSVHRGL 167