Pairwise Alignments

Query, 302 a.a., sugar ABC transporter permease from Pantoea sp. MT58

Subject, 328 a.a., ABC transporter for D-trehalose/D-maltose/sucrose, permease component 1 (ThuF) (from data) from Sinorhizobium meliloti 1021

 Score =  228 bits (580), Expect = 2e-64
 Identities = 118/296 (39%), Positives = 182/296 (61%), Gaps = 14/296 (4%)

Query: 4   LRQREQRQAWVLLAPMLLVMLLLTAWPLLRTIWLSFTDAAL--------IGSGESPAWIG 55
           L+ +  R AW+ LAP  LV+ L+  WPL+RTI+ SFT+A+L        +G     +WI 
Sbjct: 23  LQAQRVRSAWLFLAPTFLVLALVAGWPLIRTIYFSFTNASLTNLSGAEFVGFANYLSWIT 82

Query: 56  LEN----YLYALSDPDFRASIWRTLYFTVVSVTLEGIIGVLVALLLNQKFIGRNVLRVLV 111
           L++    Y   L+DP +  ++W TL FTV+SV++E  +G++VAL+LN +F GR ++R  +
Sbjct: 83  LKSGRTIYRGLLADPAWWNAVWNTLKFTVLSVSIETALGLIVALVLNAQFPGRGLVRAAI 142

Query: 112 ILPWALPTIVNAMMWRLNFNPDYGSINALLSQLGIIDGYRSWLGSPDAALNAVMFADIWK 171
           ++PWA+PTIV+A MW    N  +G +N +L  LG+I    +W  SPD A+ A +  D+WK
Sbjct: 143 LIPWAIPTIVSAKMWAWMLNDQFGILNDMLIGLGLIGEKIAWTASPDTAMIAELIVDVWK 202

Query: 172 NYPLVTLLVLAALQSIPEDLFEAARLDGASAWRRFRAITFPAIVAPLGVALVLRTIDAFK 231
             P + LL+LA LQ +P D++EAA++DG    R F  +T P I   L VA++ R +DA +
Sbjct: 203 TTPFMALLILAGLQMVPGDIYEAAKIDGVHPVRVFWRVTLPLIRPALMVAVIFRMLDALR 262

Query: 232 IFDIIYVMTRGGPVDSTKTLSFFVYQESFSYLRAGSGAAYAILMTLMCALLITLYL 287
           IFD+IYV+T       TKT+S    +  F + +   GAA + ++ L+ A +  LY+
Sbjct: 263 IFDLIYVLTPNNA--QTKTMSVMARENLFDFDKFAYGAAASTMLFLIIATITILYM 316