Pairwise Alignments

Query, 271 a.a., carbohydrate ABC transporter permease from Pantoea sp. MT58

Subject, 275 a.a., permease protein of sugar ABC transporter from Synechococcus elongatus PCC 7942

 Score =  148 bits (373), Expect = 1e-40
 Identities = 89/262 (33%), Positives = 142/262 (54%), Gaps = 6/262 (2%)

Query: 15  VALMTILPFLMALMTSFKTQMELFQGIFTL--PASLNFKNYVTAWQQGH-FNVYFLNSVL 71
           ++L ++ P L  L+TS K   ++   I T+  P     ++Y   WQQ   F  Y LNS +
Sbjct: 14  LSLFSLAPILWQLLTSIKVNADI-AAIPTIYWPRQWTVEHYQALWQQTPAFGRYLLNSAV 72

Query: 72  VVIPVVLFSVLLGILAGFGFAWLKIPGKKVIGAMLALGMVLPSEAFIIPLYHELRWMGLT 131
           V     L ++L+G    +  A  +    +V+   L L  + P       L   +RW+   
Sbjct: 73  VSAIATLAALLIGTPCAYAIARRRDRSSQVLVGSLLLVTLFPYVLLFQGLLEVVRWLQWG 132

Query: 132 NTYLALILPQIALSLPFTTLMIASAFQQVPKELVEAAVMDGASRVKILWGILVPAIWPTL 191
           N Y AL++P  AL+LP   L++ S F+Q+P EL EAA +DG S  + LW ILVP   P L
Sbjct: 133 NNYAALVVPYTALNLPLVILLLRSFFEQLPPELEEAAQIDGLSLGQRLWLILVPLTAPAL 192

Query: 192 STLGLLLFIWTWNEFLIPLILVNKDELRTLPIGMMFFQNKNTIDIPV--LMAGAMIVIMP 249
            T G+L FI++WNE+++ L  +++  L+T+PI +      +  D+P   + A  ++  +P
Sbjct: 193 VTAGILAFIFSWNEYVLALSFISQQALKTVPIAVAEIGGISIFDVPYGDIAAATVVATLP 252

Query: 250 LIVVFLIFQRKFISGVTEGAVK 271
           LI + L+ QR+ + G+T GAVK
Sbjct: 253 LIGLVLVAQRRILEGLTAGAVK 274