Pairwise Alignments

Query, 271 a.a., carbohydrate ABC transporter permease from Pantoea sp. MT58

Subject, 312 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

 Score =  139 bits (349), Expect = 1e-37
 Identities = 85/271 (31%), Positives = 142/271 (52%), Gaps = 9/271 (3%)

Query: 10  ALIWIVALMTILPFLMALMTSFKTQMELFQG-IFTLPASLNFKNYVTAWQQGHFNV---- 64
           A++ + AL  +LP  + L+TS KT  ++  G +  LP +L F+ ++ AW      V    
Sbjct: 41  AVLVLFALYYLLPLFVMLLTSVKTLDDIRAGSLIALPRTLTFEPWLKAWDSACVGVQCAG 100

Query: 65  ---YFLNSVLVVIPVVLFSVLLGILAGFGFAWLKIPGKKVIGAMLALGMVLPSEAFIIPL 121
              YFLNS+L+V+P V  S +LG L G+     + PG ++I A++  G  +P +  ++P+
Sbjct: 101 LKPYFLNSLLLVVPAVAISTVLGALNGYALTKWRFPGSQLIFALMLFGCFIPFQVVLLPM 160

Query: 122 YHELRWMGLTNTYLALILPQIALSLPFTTLMIASAFQQVPKELVEAAVMDGASRVKILWG 181
              L   GL  +   LIL  +   L FTTL   + +  VP ELV AA +DGA   +I + 
Sbjct: 161 ARVLGLAGLAGSIQGLILVHVVYGLSFTTLFFRNFYMTVPDELVRAATIDGAGFFRIFFS 220

Query: 182 ILVPAIWPTLSTLGLLLFIWTWNEFLIPL-ILVNKDELRTLPIGMMFFQNKNTIDIPVLM 240
           IL+P   P +    +  F   +N+FL  +   V+  +  T+ +  +   +    +  V M
Sbjct: 221 ILLPMSPPIIVVTIIWQFTQIYNDFLFGVSFTVSGGQPVTVALNNLVASSTGVKEYNVDM 280

Query: 241 AGAMIVIMPLIVVFLIFQRKFISGVTEGAVK 271
           A A++  +P +VV+ +  + FI G++ GAVK
Sbjct: 281 AAAILTALPTLVVYAVAGKYFIRGLSAGAVK 311