Pairwise Alignments

Query, 477 a.a., serine-type D-Ala-D-Ala carboxypeptidase from Pantoea sp. MT58

Subject, 487 a.a., serine-type D-Ala-D-Ala carboxypeptidase from Vibrio cholerae E7946 ATCC 55056

 Score =  310 bits (793), Expect = 9e-89
 Identities = 165/450 (36%), Positives = 260/450 (57%), Gaps = 12/450 (2%)

Query: 30  LPDGANLALMVQKVGASTPIIDYHGKQMALPASTMKVVTALAALLELGGDFRFQTTFETR 89
           LP GA  +L+++ V      ++ +      PAST K++TALAA LELG  FRF T     
Sbjct: 41  LPQGARYSLLIEDVALQQNTLELNTHLYYPPASTQKILTALAAKLELGDKFRFHTDLMRS 100

Query: 90  GAIIDGTLNGDLVARFGGDPTLTRQDLRNMVAAIKKQGINHIKGNLVIDTSVFASHDMAP 149
           G         D + RF GDPTLT  DL  ++ A+K Q    I+G+L +D SVF+ ++ A 
Sbjct: 101 GQ--------DWIIRFSGDPTLTTADLTTLLKAMKAQSGGRIEGDLWLDNSVFSGYERAV 152

Query: 150 GWPWNDMTQCFSAPPGAAIVDKNCFSVSLYSANTPGENAFVRIASYYPAHMYSQVRTIGR 209
           GWPW+ +  C+SAP  A  +D NC   S+Y+   P     V +  +YP H+ SQ  ++ +
Sbjct: 153 GWPWDILGVCYSAPASAINLDANCIQASIYTE--PQGKTRVYVPEHYPVHVQSQAISVTQ 210

Query: 210 NSGEGQYCELDVVPGELNRYTLTGCMRQRAEPLPLAFAVQDGAAWAGEILKAELRSSEID 269
           +  E   C+L++     N YTL GC+  R +PLPL FAVQD   +   ++   L    I+
Sbjct: 211 SEQESLLCDLELTATPENHYTLDGCLALRDKPLPLKFAVQDTGIYTQRVVYRLLSQLNIE 270

Query: 270 YSGHLVRQTQVTEPGTVLASTQSAPLHTLLHTMLKKSDNMIADTVFRTIGHHYFNVPGTF 329
             G +      T+    +AS  S PL  LL TML++SDN+IADT+ + +GH +++ PG+F
Sbjct: 271 LKGKIKVGKANTKQAQKIASHHSQPLPVLLKTMLQESDNLIADTLTKALGHRFYSQPGSF 330

Query: 330 RAGQDAVRRILKAKANVDMGNSIQVDGSGLSRHDLISPQTMMQVLQFIAKNDNTLDYISM 389
             G  A+++I  ++  + + ++   DGSGLSR++ + PQ M++ L+++ +++  L  I+M
Sbjct: 331 TNGTQAIKQIFYSRTGISLEDTQLADGSGLSRNNRMRPQVMLETLRYLYQHEAELGLIAM 390

Query: 390 LPLAGYDGTLQYRGGLHEAGLDGKVSAKTGSLQGVYNLAGFI-TTSSGARVAFVQFLSGY 448
           LP AG  GTLQYR  +    + G++ AK+GSL G YN+AGF+   +   +  FVQF++ Y
Sbjct: 391 LPSAGESGTLQYRRSMRAPQISGQIKAKSGSLYGTYNMAGFVMDENQRPKTLFVQFVTDY 450

Query: 449 AVPPEDQRTR-RIPLVRFESRLYRDINQNN 477
             P  +       P+++FE++LY+++ Q N
Sbjct: 451 FPPRSNPEVAVEPPIIQFETQLYQELIQFN 480