Pairwise Alignments

Query, 477 a.a., serine-type D-Ala-D-Ala carboxypeptidase from Pantoea sp. MT58

Subject, 468 a.a., penicillin-binding protein, D-alanyl-D-alanine carboxypeptidase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  110 bits (274), Expect = 1e-28
 Identities = 108/433 (24%), Positives = 187/433 (43%), Gaps = 21/433 (4%)

Query: 17  QAHAAPVDEYMQ-YLPDGANLALMVQKVGASTPIIDYHGKQMALPASTMKVVTALAALLE 75
           QA+ + +D  ++  LP+ + + + V  + A   +  Y   +++ PASTMK++TA+ AL  
Sbjct: 22  QANLSQIDSLIKRMLPEASEVGISVYDLTAKKSLYTYRDTKLSRPASTMKLLTAITALSR 81

Query: 76  LGGDFRFQTTFETRGAIIDGTLNGDLVARFGGDPTLTRQDLRNMVAAIKKQGINHIKGNL 135
              D  F+T     G I   TL G+L    G DP      + +++  +     + I G +
Sbjct: 82  PDADNPFRTEVWHDGVIEHDTLQGNLYVVGGFDPEFDSLMMDSLIEEVITFPFSVINGQV 141

Query: 136 VIDTSVFASHDMAPGWPWNDMTQCFSAPPGAAIVDKNCFSVSLYSANTPGENAFVR---I 192
             D S+  S     GW W+D  + +       +  K    V++   +  G+ A V    +
Sbjct: 142 YGDVSMKDSLYWGHGWAWDDTPEAYQPYMSPLMFCKGAVEVTVVPGSLQGDTASVSCKPV 201

Query: 193 ASYYPAHMYSQVRTIGRNSGEGQYCELDVVPGELNRYTLTGCMRQRAEPLPLAFAVQDGA 252
           +SYY        RT  R    G+Y          N   +TG +    + L     V D  
Sbjct: 202 SSYYTL----TNRTKTRTPSAGKYSLSRDWLTNGNNLIVTGNVPTFRKDL---INVYDSG 254

Query: 253 AWAGEILKAELRSSEIDYSGHLVRQTQVTEPGTVLASTQSAPLHTLLHTMLKKSDNMIAD 312
           ++        LR+  I         T++   G    +    P+  +L+ ++K+SDN+ A+
Sbjct: 255 SFFMHAFLERLRAKGI-VVPESYGFTELPSDGAEQMARWETPVQKVLNQLMKESDNLNAE 313

Query: 313 TVFRTIGHHYFNVPGTFR-AGQDAVRRILKAKANV--DMGNSIQVDGSGLSRHDLISPQT 369
            +   I        G  R   +D +  I+K   N+  D  +    DG GLS ++ +SP  
Sbjct: 314 AMLCRIAS---QATGKKRVTAEDGIVEIMKLVRNLGHDPKDYKIADGCGLSNYNYLSPAL 370

Query: 370 MMQVLQF-IAKNDNTLDYISMLPLAGYDGTLQYRGGLHEAGLDGKVSAKTGSLQGVYNLA 428
           ++  L++  +++D        LP+AG DGTL+ R  +        V AKTGS   +  LA
Sbjct: 371 LVDFLKYAYSQSDVFQKLYKSLPVAGIDGTLKNR--MKNTPAFRNVHAKTGSFTAINALA 428

Query: 429 GFITTSSGARVAF 441
           G++   +G  +AF
Sbjct: 429 GYLKMKNGHTLAF 441