Pairwise Alignments

Query, 495 a.a., transcription termination/antitermination protein NusA from Pantoea sp. MT58

Subject, 511 a.a., transcription termination factor NusA from Azospirillum brasilense Sp245

 Score =  428 bits (1101), Expect = e-124
 Identities = 222/494 (44%), Positives = 330/494 (66%), Gaps = 11/494 (2%)

Query: 4   EILAVVEAVSNEKALPREKIFEALESALATATKKKYEQEIEVRVSIDRRSGDFDTFRRWE 63
           E+L V +AV+ EK + R+++ EA+E A+  A + KY  E ++R  IDR++GD    R  E
Sbjct: 2   ELLQVADAVAREKNIDRDEVLEAMEQAIQKAGRSKYGHEHDIRARIDRKTGDIHLTRHLE 61

Query: 64  IVEEVTQPTREITLDAARFEDEAFNLGEYVEDQIESVTFDRITTQTAKQVIVQKVREAER 123
           +VE V     ++TL  A+       +G+++ D +  + F RI  QTAKQVIVQKVR+AER
Sbjct: 62  VVEAVENEATQVTLAYAQRRKPGAQVGDFLVDPLPPIDFGRIAAQTAKQVIVQKVRDAER 121

Query: 124 AMVVDQFREQEGEIITGVVKKVNRDNISLDLGSNAEAVILREDMLPRENFRPGDRIRGVL 183
               ++++++ GEI+ G+VK+V   N+++DLG  AEA++ R+++LPRE+F+ GDR+R  +
Sbjct: 122 KRQFNEYKDRTGEIVNGLVKRVEYGNVTVDLG-RAEAILRRDELLPREHFKNGDRVRAYI 180

Query: 184 YSVRPEARGAQLFVTRSKPEMLIELFRIEVPEIGEELIEIKAAARDPGSRAKIAVKTNDK 243
           + VR EARG Q+F++R+ P  + +LF  EVPEI + +IEIKA ARDPGSRAKIAV +ND 
Sbjct: 181 FDVREEARGPQIFLSRTHPMFMAKLFAQEVPEIYDGIIEIKAVARDPGSRAKIAVISNDS 240

Query: 244 RIDPVGACVGMRGARVQAVSSELGGERIDIVLWDDNPAQFVINAMAPADVASIVVDEDNH 303
            IDPVGACVGMRG+RVQAV  EL GE+IDI+ W+  PA F++NA+APA+VA +V+DEDN 
Sbjct: 241 SIDPVGACVGMRGSRVQAVVGELQGEKIDIIQWNQEPATFIVNALAPAEVAKVVMDEDNS 300

Query: 304 TMDIAVEAGNLAQAIGRNGQNVRLASQLSGWELNVMTVDDLQAKHQAEAHAAIDMFTKHL 363
            +++ V    L+ AIGR GQNVRLA+QL+GW+++++T  +   +   E      +F + L
Sbjct: 301 RIEVVVPDDQLSLAIGRRGQNVRLATQLTGWDIDILTEQEESERRSDEFRTRSQLFMEAL 360

Query: 364 DIDEEFATVLVEEGFSSLEELAYVPINELLEVDGLDEETIEALRERAKNAL---TTLALA 420
           D+D+  A +LV EGF+S+EE+AYV   EL E++G DE+  E L++RA N L         
Sbjct: 361 DVDDVIAHLLVAEGFTSVEEIAYVETEELAEIEGFDEDVAEELKQRALNFLDEQDVRMTE 420

Query: 421 KEESLGNQEPAEDLLNLEGLDRALAFRLASKGVCTLEDLAEQGVDDLTDI---EGLSDEQ 477
           K ++LG ++   +   + G    L  +L   GV T++DLA+   D+L DI   E  ++++
Sbjct: 421 KRQALGVEDAVAE---VTGFSPTLLVKLGENGVKTMDDLADLAADELRDILGKEAPTEDE 477

Query: 478 AGALIMAARNICWF 491
           A  +IMAAR   WF
Sbjct: 478 ANEIIMAAR-AHWF 490