Pairwise Alignments

Query, 495 a.a., transcription termination/antitermination protein NusA from Pantoea sp. MT58

Subject, 428 a.a., N utilization substance protein A (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  281 bits (720), Expect = 2e-80
 Identities = 155/436 (35%), Positives = 260/436 (59%), Gaps = 14/436 (3%)

Query: 1   MNKEILAVVEAVSNEKALPREKIFEALESALATATKKKYEQEIEVRVSIDRRSGDFDTFR 60
           M+ E+   ++ +S +K L R+ +   LE A+ T+  +KY  +I+V VS +  SG+ + ++
Sbjct: 1   MSMELKKAIDQISKDKGLERDMLVATLEEAVRTSVVRKYGDDIDVEVSYNDESGEIEVYQ 60

Query: 61  RWEIVEEVTQPTRE----ITLDAARFEDEAFNLGEYVEDQIESVTFDRITTQTAKQVIVQ 116
              +V E+     +    I L+ AR  D +  + + +  +++     RI  Q+AKQVI+Q
Sbjct: 61  FKIVVAELDDEDEDGNAHIVLEEARKHDPSVQIDDEMGFRLKVEDLGRIAAQSAKQVIIQ 120

Query: 117 KVREAERAMVVDQFREQEGEIITGVVKKVNRDNISLDLGSNAEAVILREDMLPRENFRPG 176
           ++R+AE+ ++ D+F+++ GEII+G++++ ++    ++LG   EA++ +E+ +PRE+++ G
Sbjct: 121 RMRDAEQELIYDEFKDRRGEIISGIIQRRDKAGWIINLG-RTEALLPKEEQIPREHYKRG 179

Query: 177 DRIRGVLYSVRPEARGAQLFVTRSKPEMLIELFRIEVPEIGEELIEIKAAARDPGSRAKI 236
           DR++ ++  VR E RG Q+ V+RS  + +  LFR EVPE+ +  ++I   ARDPGSRAK+
Sbjct: 180 DRVQAIIIEVRKEGRGPQVIVSRSHRDYMAALFRREVPEVDDGTVQIMGVARDPGSRAKV 239

Query: 237 AVKTNDKRIDPVGACVGMRGARVQAVSSELGGERIDIVLWDDNPAQFVINAMAPADVASI 296
           AV + ++ +DPVGACVG+RG+R+Q V  EL GERIDIV+W    A +  NA++PA ++ I
Sbjct: 240 AVLSRERDVDPVGACVGIRGSRIQNVVQELRGERIDIVVWSPEIATYARNALSPAVISRI 299

Query: 297 VVDEDNHTMDIAVEAGNLAQAIGRNGQNVRLASQLSGWELNVMTVDDLQAKHQAEAHAAI 356
           VVDE+ + +++ V    L  AIGR GQNV+LA++L GW++++ T          EA+A  
Sbjct: 300 VVDEEENLLEVIVPDDQLTNAIGRKGQNVKLAAKLLGWKIDIYT-----ETRYNEANAIG 354

Query: 357 DMFTKHLDIDEEFATVLVEEGFSSLEELAYVPINELLEVDGLDEETIEALRERAKNALTT 416
               +   + E      V  GF S+E L      EL    G+D+  I  LR     A+  
Sbjct: 355 RGLEQIASVAEISIEQFVTAGFQSIERLREASDEELASGLGIDDNRIADLRA----AINF 410

Query: 417 LALAKEESLGNQEPAE 432
           L+ A   S G+    E
Sbjct: 411 LSPAPSASDGDDADGE 426