Pairwise Alignments

Query, 495 a.a., transcription termination/antitermination protein NusA from Pantoea sp. MT58

Subject, 491 a.a., transcription termination factor NusA from Ralstonia sp. UNC404CL21Col

 Score =  486 bits (1250), Expect = e-141
 Identities = 243/494 (49%), Positives = 364/494 (73%), Gaps = 7/494 (1%)

Query: 1   MNKEILAVVEAVSNEKALPREKIFEALESALATATKKKYEQEIEVRVSIDRRSGDFDTFR 60
           M++E+L +V+A++ EK + ++ +F ALE+ALA+ATKK++E++++VRV+IDR SG+ +TFR
Sbjct: 1   MSREVLLLVDALAREKNVDKDVVFGALEAALASATKKRFEEDVDVRVAIDRESGEHETFR 60

Query: 61  RWEIVEE---VTQPTREITLDAARFEDEAFNLGEYVEDQIESVTFDRITTQTAKQVIVQK 117
           RW +V +   + +P ++I L  A+ ++   ++ ++VE+QIESV F RI  Q AKQVI+Q+
Sbjct: 61  RWLVVPDDAGLQEPDKQILLFEAKEQNPDLDVDDFVEEQIESVEFGRIGAQAAKQVILQR 120

Query: 118 VREAERAMVVDQFREQEGEIITGVVKKVNRDNISLDLGSNAEAVILREDMLPRENFRPGD 177
           +R+AER  +++ + ++  +++TG +K+ ++  + ++ G   EA++ R+ M+P+EN R GD
Sbjct: 121 IRDAEREQILNDYLDRGEKVMTGTIKRADKKGLIVETG-RVEALLARDQMIPKENLRTGD 179

Query: 178 RIRGVLYSVRPEARGAQLFVTRSKPEMLIELFRIEVPEIGEELIEIKAAARDPGSRAKIA 237
           R+R  + +V   ARG Q+ ++R+ PE LI+LF  EVPE+ + L+EIKAAARDPG RAKIA
Sbjct: 180 RVRAYILNVDRTARGPQIELSRTCPEFLIKLFENEVPEMEQGLLEIKAAARDPGVRAKIA 239

Query: 238 VKTNDKRIDPVGACVGMRGARVQAVSSELGGERIDIVLWDDNPAQFVINAMAPADVASIV 297
           V  +DKRIDP+G CVG+RG RV AV +E+GGE +DIVLW ++PAQFVI A+APA V SIV
Sbjct: 240 VVAHDKRIDPIGTCVGVRGTRVTAVRNEVGGEAVDIVLWSEDPAQFVIGALAPAQVQSIV 299

Query: 298 VDEDNHTMDIAVEAGNLAQAIGRNGQNVRLASQLSGWELNVMTVDDLQAKHQAEAHAAID 357
           VDE+ H+MD+ V+  NLA AIGR+GQNVRLAS+L+GW++N+MT  +   K   E+     
Sbjct: 300 VDEEKHSMDVVVDEENLAVAIGRSGQNVRLASELTGWQINIMTPAESAQKQAEESSVVRQ 359

Query: 358 MFTKHLDIDEEFATVLVEEGFSSLEELAYVPINELLEVDGLDEETIEALRERAKNALTTL 417
           +F   LD+DEE A +L+EEGFSSLEE+AYVP+ E+LE++  DE+T+  LR RA++ L T+
Sbjct: 360 LFMAKLDVDEEVADILIEEGFSSLEEVAYVPLQEMLEIEAFDEDTVNELRNRARDVLLTM 419

Query: 418 ALAKEESLGNQEPAEDLLNLEGLDRALAFRLASKGVCTLEDLAEQGVDDLTDIEGLSDEQ 477
            LAKEE +  ++ ++DL +LEGL   L  +LA   + T +DLAE  VD+L ++ G+ +EQ
Sbjct: 420 ELAKEEKV--EKVSQDLRDLEGLTPELIGKLAEGNIQTRDDLAELAVDELVEMTGVDEEQ 477

Query: 478 AGALIMAARNICWF 491
           A ALIM AR   WF
Sbjct: 478 AKALIMKARE-HWF 490