Pairwise Alignments

Query, 850 a.a., type VI secretion system ATPase TssH from Pantoea sp. MT58

Subject, 854 a.a., ATP-dependent chaperone ClpB from Pseudomonas stutzeri RCH2

 Score =  501 bits (1291), Expect = e-146
 Identities = 313/792 (39%), Positives = 453/792 (57%), Gaps = 55/792 (6%)

Query: 20  LNAAVSQAVSRTHHEVSVEHLLLALITTQTVLLEQLCLGAGLRGDQLADALTHSLNQ-QR 78
           L+ A S AV   H  +   HL+ AL+  Q   ++ L +  G     L  ALT  L+Q  +
Sbjct: 14  LSDAQSIAVGLDHPAIEPLHLMQALLEQQGGSIKPLLMQVGFDIAALRQALTKELDQLPK 73

Query: 79  SGNTCGPV-LSESLVRHLEKAWLHASICWHQRHLPATAFIGCLLADPDDVTLPLPTEVRQ 137
             N  G + LS+ L R L +A   A     Q+     +    LLA  D  T      + Q
Sbjct: 74  LQNPTGDMNLSQDLARLLNQADRLAQ----QKGDQYISSELVLLAALDSNTRLGKLLLAQ 129

Query: 138 ALHCDVLKADALMAEYSGTGQKKDNTEEGVPSGGPALLKYTHNLTQKARRGELDPATGRE 197
            +    L+ +A+     G      N EE       AL KYT ++T++A  G+LDP  GR+
Sbjct: 130 GVSKKALE-NAINNLRGGDAVNDPNAEES----RQALDKYTVDMTKRAEDGKLDPVIGRD 184

Query: 198 NEIRQMIDVLLRRRQNNPILTGEPGVGKTALVEGLAQRIVSGTVPDALKKMDIMSLDLSL 257
           +EIR+ I VL RR +NNP+L GEPGVGKTA+VEGLAQRIV+G VPD LK   +++LD+  
Sbjct: 185 DEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDGLKDKRLLALDMGS 244

Query: 258 LQAGASVKGEFENRLQSLLCDIQSHPVPIILFIDEAHMLVGAGGTAGQNDAANLLKPALA 317
           L AGA  +GEFE RL+++L D+      +ILFIDE H +VGAG   G  DA N+LKPALA
Sbjct: 245 LIAGAKFRGEFEERLKAVLNDLSKQEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALA 304

Query: 318 RGELRMIGATTWSEYKKYFEKDAALARRFQIVRVTEPDRDTAINMLRSIVPAISSHHGIP 377
           RGEL  +GATT  EY++Y EKDAAL RRFQ V V EP  +  I +LR +      HHG+ 
Sbjct: 305 RGELHCVGATTLDEYRQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHGVT 364

Query: 378 VPDSAIVAAVEFSARYLPGRQLPDKSVTLLDTACARVALSQSDEPREIEDLNVMLRNISL 437
           + D AI+AA + S RY+  RQLPDK++ L+D A +R+ +    +P E++ L+  L  + +
Sbjct: 365 ITDGAIIAAAKLSHRYITDRQLPDKAIDLIDEAASRIRMEIDSKPEELDRLDRRLIQLKI 424

Query: 438 ERRSLSLDSGCAT--RIAWLDQRKAEIKQDLTILTPVWKEQQSLVARIAQCQNSEQQAS- 494
           ER +L  +   AT  R+A L+   A++ ++   L  +WK +++ V   AQ Q   +QA  
Sbjct: 425 EREALKKEDDEATKKRLAKLEDDIAKLAREYADLEEIWKSEKAEVQGSAQIQQKIEQAKA 484

Query: 495 ------------------------LRQKLSVMH----KQQPMVFERVDAACVAEIIAGWT 526
                                   L + L ++     K+  ++  +V    +AE+++ WT
Sbjct: 485 ELEAARRKGDLARMAELQYGIIPDLERSLEMVDQHGKKENQLLRNKVTDEEIAEVVSKWT 544

Query: 527 GIPVEQILEQKQGPLNTLYERLCERVTGQSHALEAIVRQIRTSRAGLADPLKPMGVFMLA 586
           GIPV ++LE ++  L  + + L  RV GQ  A+ A+   +R SRAGLADP +P G F+  
Sbjct: 545 GIPVSKMLEGERDKLLRMEDMLHTRVIGQHEAVVAVSNAVRRSRAGLADPNRPSGSFLFL 604

Query: 587 GPSGTGKTETALALAEMLYGGSRGLITLNMSEYQEAHSVAGLKGSPPGYVGYGQGGVLTE 646
           GP+G GKTE   ALAE L+     +I ++MSE+ E HSVA L G+PPGYVGY +GG LTE
Sbjct: 605 GPTGVGKTELCKALAEFLFDTEEAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTE 664

Query: 647 AVRRQPYSVVLIDEVEKAHRDVIELFYQVFDKGVMEDSEGQTIDFRNTFIILTSNLA--- 703
           AVRR+PYSVVL+DEVEKAH DV  +  QV + G + DS G+T+DF+NT I++TSNL    
Sbjct: 665 AVRRKPYSVVLMDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSTQ 724

Query: 704 -DDVIMAAGEKESPDINALVRQIRPEFSRVFPAAFMGRL-TLLPYLPLSAQALNNIINAK 761
             +++   G + +  ++A+    RPE        F+ R+  ++ + PL  + +  I + +
Sbjct: 725 IQELVGDPGAQRAAVMDAVAHHFRPE--------FINRIDEVVVFDPLGREQIAGIADIQ 776

Query: 762 LRKISLRFSGRD 773
           L ++  R + R+
Sbjct: 777 LGRLRKRLAERE 788