Pairwise Alignments

Query, 850 a.a., type VI secretion system ATPase TssH from Pantoea sp. MT58

Subject, 863 a.a., type VI secretion ATPase, ClpV1 family from Pseudomonas stutzeri RCH2

 Score =  647 bits (1668), Expect = 0.0
 Identities = 379/852 (44%), Positives = 518/852 (60%), Gaps = 45/852 (5%)

Query: 5   LKKITEVFSADARYCLNAAVSQAVSRTHHEVSVEHLLLALITTQTVLLEQLCLGAGLRGD 64
           L+++ +   A+ +  L  A  + V R   ++ VE LLL L+     LL++  L A +   
Sbjct: 6   LQQLVQALDAETKRDLEGAAERCVVRGGSKILVEDLLLGLLERSDGLLKRALLDAEVDAG 65

Query: 65  QLADALTHSLNQQRSGNTCGPVLSESLVRHLEKAWLHASICWHQRHLPATAFIGCLLADP 124
            LA AL        S N   PV S  LV+ L+ A L AS+   Q  +   A I  LL +P
Sbjct: 66  ALAQALQPRGEHSESRN---PVFSTELVQWLQDALLVASLELGQSQIDQAALILALLRNP 122

Query: 125 DDVTLPLPTEVRQALHCDVLKADA-LMAEYSGTGQKKDNTEEGVPSGGPALLKYTHNLTQ 183
               L       Q L   + + DA  + +++ + Q + +T +    G   L ++THN TQ
Sbjct: 123 ----LRYAGSHYQPL---LARLDAERLRDFALSQQPQGSTGKPAAGGESNLARFTHNFTQ 175

Query: 184 KARRGELDPATGRENEIRQMIDVLLRRRQNNPILTGEPGVGKTALVEGLAQRIVSGTVPD 243
           +AR G+LDP   R++ IRQMID+L RRR+NNPI+ GE GVGKTA+VEGLA RI SG VP 
Sbjct: 176 QARDGKLDPVLCRDSAIRQMIDILARRRKNNPIVVGEAGVGKTAIVEGLALRIASGEVPA 235

Query: 244 ALKKMDIMSLDLSLLQAGASVKGEFENRLQSLLCDIQSHPVPIILFIDEAHMLVGAGGTA 303
            LK ++++ LDL LLQAGASVKGEFE RLQ ++ ++++ P PIILFIDEAH L+GAGG A
Sbjct: 236 TLKGVELLCLDLGLLQAGASVKGEFERRLQGVIDEVKASPKPIILFIDEAHTLIGAGGQA 295

Query: 304 GQNDAANLLKPALARGELRMIGATTWSEYKKYFEKDAALARRFQIVRVTEPDRDTAINML 363
           G  DAANLLKPALARGELR I ATTWSEYKKYFEKD ALARRFQ V++ EP    A+ +L
Sbjct: 296 GSGDAANLLKPALARGELRTIAATTWSEYKKYFEKDPALARRFQPVQLHEPSVQEAVTIL 355

Query: 364 RSIVPAISSHHGIPVPDSAIVAAVEFSARYLPGRQLPDKSVTLLDTACARVALSQSDEPR 423
           R + P     HGI + D A+ AA E SARYL GRQLPDK+V +LDTACARV +S +  P 
Sbjct: 356 RGLAPVYEKSHGIYLRDDAVAAAAELSARYLAGRQLPDKAVDVLDTACARVRISLAAAPE 415

Query: 424 EIEDLNVMLRNISLERRSLSLDSGC-----ATRIAWLDQRKAEIKQDLTILTPVWKEQQS 478
            +E L   +     +R ++  D        A  +  L+QR      ++  L   W +Q+ 
Sbjct: 416 ALERLRGEVAEGERQREAMRRDLAVGLPVDAAALERLEQRLIAAGDEIEQLETRWAKQRL 475

Query: 479 LVARIAQCQNSEQQA---------------------SLRQKLSVMHKQQPMVFERVDAAC 517
           L  R+   +    +A                     +++ +L+    +Q +V   V    
Sbjct: 476 LAERLLDLRKRTAEARSAANEDGEVPSLDELETELRAVQAELAAAQAKQRLVSHEVCPRL 535

Query: 518 VAEIIAGWTGIPVEQILEQKQGPLNTLYERLCERVTGQSHALEAIVRQIRTSRAGLADPL 577
           VAE+I+ WTG+P+ Q+  +    +      L  RV GQ  A+EA+ R +R + AGL  P 
Sbjct: 536 VAEVISHWTGVPLAQLAREHNAQVANFAADLRARVRGQEQAVEALDRAMRAAAAGLNKPD 595

Query: 578 KPMGVFMLAGPSGTGKTETALALAEMLYGGSRGLITLNMSEYQEAHSVAGLKGSPPGYVG 637
            P+GVF+L GPSG GKTETALALA++LYGG R L  +NMSE+QE HSV+ L G+PPGYVG
Sbjct: 596 APVGVFLLVGPSGVGKTETALALADLLYGGERFLTVINMSEFQEKHSVSRLIGAPPGYVG 655

Query: 638 YGQGGVLTEAVRRQPYSVVLIDEVEKAHRDVIELFYQVFDKGVMEDSEGQTIDFRNTFII 697
           YG+GG+LTEAVR++PYSV+L+DEVEKA  DV+ +FYQ+FDKGV  D EG+ I+FRNT I+
Sbjct: 656 YGEGGMLTEAVRQKPYSVILLDEVEKADPDVMNVFYQIFDKGVANDGEGREINFRNTLIL 715

Query: 698 LTSNLADDVIMA---AGEKESPDINALVRQIRPEFSRVFPAAFMGRLTLLPYLPLSAQAL 754
           +TSNLA + I +   AG++  P    L   IRP+ S+ F  A +GR+ ++PY P++   L
Sbjct: 716 MTSNLASERIASFCTAGQR--PTAEDLELAIRPQLSQHFKPALLGRMRVVPYYPIAGAVL 773

Query: 755 NNIINAKLRKISLRFSGRDGEKRSLSYSPAVVRYIADRCHVRQSGARDVDTVINQSLLPL 814
           + ++  KL +   R   R   +   S+ PA+V ++++RC    SGAR +D +I Q L PL
Sbjct: 774 DELVALKLVRFGERLQRR---QLQFSHCPALVTHLSERCDDSDSGARLIDHLIEQHLQPL 830

Query: 815 VTDYLLEADGSG 826
           V D LL+A  SG
Sbjct: 831 VVDRLLDAMASG 842