Pairwise Alignments

Query, 850 a.a., type VI secretion system ATPase TssH from Pantoea sp. MT58

Subject, 870 a.a., Chaperone clpB (NCBI) from Rhodospirillum rubrum S1H

 Score =  503 bits (1296), Expect = e-146
 Identities = 322/842 (38%), Positives = 472/842 (56%), Gaps = 65/842 (7%)

Query: 20  LNAAVSQAVSRTHHEVSVEHLLLALITTQTVLLEQLCLGAG---LRGDQLADALTHSLNQ 76
           L AA + A+  TH +V+ EHLL AL+  +  L   L   AG   LR  +  +     L +
Sbjct: 14  LQAAQTIALRETHQQVTPEHLLKALLDDKEGLAANLIRAAGGDPLRAQEAVNREVDKLPK 73

Query: 77  QRSGNTCGPVLSESLVRHLEKAWLHA-----SICWHQRHLPATAFIGCLLADPDDVTLPL 131
            +         ++SL R +++A   A     S    +R L A A        P    L  
Sbjct: 74  VQGAQQM--YWAQSLARVIDQATRMAEKAGDSFVTVERLLIALAMAA---ETPAKRILAE 128

Query: 132 PTEVRQALHCDVLKADALMAEYSGTGQKKDNTEEGVPSGGPALLKYTHNLTQKARRGELD 191
                Q L+  V        E    G+K D+   G  S   AL KY  +LT+ AR G+LD
Sbjct: 129 AGATPQGLNKAV--------EDLRKGRKADSA--GAESQYDALKKYARDLTEAAREGKLD 178

Query: 192 PATGRENEIRQMIDVLLRRRQNNPILTGEPGVGKTALVEGLAQRIVSGTVPDALKKMDIM 251
           P  GR+ EIR+ I VL RR +NNP+L GEPGVGKTA++EGLA RIV+G VP++L+   +M
Sbjct: 179 PVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIIEGLALRIVNGDVPESLQNKKLM 238

Query: 252 SLDLSLLQAGASVKGEFENRLQSLLCDIQSHPVPIILFIDEAHMLVGAGGTAGQNDAANL 311
           +LDL  + AGA  +GEFE RL+++L ++ +    IILFIDE H L+GAG   G  DA+NL
Sbjct: 239 ALDLGAMVAGAKFRGEFEERLKAMLTEVSAAEGEIILFIDEMHTLIGAGAGEGAMDASNL 298

Query: 312 LKPALARGELRMIGATTWSEYKKYFEKDAALARRFQIVRVTEPDRDTAINMLRSIVPAIS 371
           LKPALARG+L  +GATT +EY+K+ EKDAALARRFQ V V+EP     I++LR I     
Sbjct: 299 LKPALARGDLHCVGATTLNEYRKHVEKDAALARRFQPVFVSEPGVADTISILRGIKEKYE 358

Query: 372 SHHGIPVPDSAIVAAVEFSARYLPGRQLPDKSVTLLDTACARVALSQSDEPREIEDLNVM 431
            HHG+ + D+A+VAA   S RY+  R LPDK++ L+D A +R+ +    +P  +++L+  
Sbjct: 359 LHHGVRIADNALVAAATLSNRYITDRFLPDKAIDLMDEAASRLRMEVDSKPEALDELDRR 418

Query: 432 LRNISLERRSLSLDSGCAT--RIAWLDQRKAEIKQDLTILTPVWKEQQSLVARIAQCQNS 489
           +  + +ER +L  +   A+  R++ L++  A+++     LT  WK ++  +A   + +  
Sbjct: 419 IIQLKIEREALRKEKDIASEARLSDLEKELADLESQSATLTEDWKREKEGLAGSTRIKEQ 478

Query: 490 EQQA-------------------------SLRQKL-------SVMHKQ-QPMVFERVDAA 516
            +QA                          L ++L        + H+Q   +V E V A 
Sbjct: 479 LEQARGDLDIAKRQANWARAGELEYGVIPDLERRLGEVESGDGLAHRQGGKLVNEVVTAE 538

Query: 517 CVAEIIAGWTGIPVEQILEQKQGPLNTLYERLCERVTGQSHALEAIVRQIRTSRAGLADP 576
            +A +++ WTGIPV+++L  ++  L  + + L  RV GQ  A+ A+   +R SRAGL DP
Sbjct: 539 TIASVVSRWTGIPVDKMLAGEREKLLGMEKVLASRVVGQREAVVAVSNAVRRSRAGLQDP 598

Query: 577 LKPMGVFMLAGPSGTGKTETALALAEMLYGGSRGLITLNMSEYQEAHSVAGLKGSPPGYV 636
            +PMG F+  GP+G GKTE   ALA  L+   + ++ ++MSEY E H+V+ L G+PPGYV
Sbjct: 599 NRPMGSFLFLGPTGVGKTELTKALAAFLFDDEQAMVRIDMSEYMEKHAVSRLIGAPPGYV 658

Query: 637 GYGQGGVLTEAVRRQPYSVVLIDEVEKAHRDVIELFYQVFDKGVMEDSEGQTIDFRNTFI 696
           GY +GG LTEAVRR+PY V+L DEVEKAH DV  +  QV D G + D +G+T+DFRNT I
Sbjct: 659 GYDEGGALTEAVRRRPYQVILFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLI 718

Query: 697 ILTSNLADDVIMAAGEKESPDINALVRQIRPEFSRVFPAAFMGRL-TLLPYLPLSAQALN 755
           +LTSNL  D++  A + E  D  A+   +       F   F+ RL  +L +  L  + + 
Sbjct: 719 VLTSNLGADIL--ANQPEGDDSGAVRGAVMEMVRAAFRPEFLNRLDEILLFHRLFRENMA 776

Query: 756 NIINAKLRKISLRFSGRDGEKRSLSYSPAVVRYIADRCHVRQSGARDVDTVINQSL-LPL 814
            I++ +L +++ R   R   K +L    A   ++A+R +    GAR +  VI +SL  PL
Sbjct: 777 GIVSIQLGRLADRLRDR---KMTLDLDDAARDWLAERGYDPVYGARPLKRVIQRSLENPL 833

Query: 815 VT 816
            T
Sbjct: 834 AT 835