Pairwise Alignments

Query, 379 a.a., cytochrome d ubiquinol oxidase subunit II from Pantoea sp. MT58

Subject, 380 a.a., cytochrome d oxidase, subunit II (cydB) from Pseudomonas stutzeri RCH2

 Score =  439 bits (1128), Expect = e-128
 Identities = 214/380 (56%), Positives = 269/380 (70%), Gaps = 1/380 (0%)

Query: 1   MFNYEVLRFVWWLLIGVLLIGFAVADGFDMGVGMLTRILGRTDTERRIMINSIAPHWDGN 60
           MF+YEVL+ VWW+LIGVLLIGFA+ DGFDMG   L   +G+TD ERR+ IN+IAPHWDGN
Sbjct: 1   MFDYEVLKLVWWVLIGVLLIGFALTDGFDMGAMALMPFVGKTDNERRVAINTIAPHWDGN 60

Query: 61  QVWLITAGGALFAAWPMVYAAAFSGFYVAMILVLASLFFRPVGFDYRSKIEDNRWRGAWD 120
           QVW ITAGGALFAAWPMVYA AFSG Y AM+LVL +LF RPVGFDYRSK+ED RWR AWD
Sbjct: 61  QVWFITAGGALFAAWPMVYAVAFSGLYWAMLLVLFALFCRPVGFDYRSKVEDPRWRSAWD 120

Query: 121 WGIFIGSFVPPLVIGVAFGNLLQGVPFHADEYLRLFYTGNFFQLLNPFGLLAGVVSVAMI 180
           W +F+G  VP LV GVAFGNL  G+PF  DE +R  Y G+FF LLNPF LL G+VS++M+
Sbjct: 121 WALFVGGAVPALVFGVAFGNLFLGLPFQLDELMRSTYQGSFFALLNPFALLCGIVSLSML 180

Query: 181 LAQGATYLQMRTTGELHLRSRTAAQLAALVMMACFILAGVWVKYGIDGYVVTSTMDHFAA 240
            A G  +L +RT G L  RSR A +L ALV +  F+ AG+W+  G+ G+   S  D  AA
Sbjct: 181 SAHGGAWLMLRTDGALAERSRQATRLCALVFLVGFLAAGLWLMLGVQGFTQLSVTDPGAA 240

Query: 241 SNP-LGKTVVREAGAWMVNFQNHPVLWLFPLLGVVLPLLTILCSRVEKGAWAFLFSSLTL 299
            NP L K VV++   W+ N+  +P+  + P+ G++  LL +L S    G  +F+ +SL +
Sbjct: 241 LNPLLDKQVVQDNAGWLGNYGRYPITLIAPVAGILGALLALLGSSRNSGGASFVGTSLMI 300

Query: 300 ACVIMTAGIAMFPFIMPSSTVPGTSLTMWDATSSLLTLQTMTVAAAIFVPIILIYTTWCY 359
              I TAG A+FPF+ PSS  P +SLT+WDA SS  TL  M V A IFVP+IL YT W Y
Sbjct: 301 VGSICTAGFALFPFVFPSSLDPASSLTIWDAVSSKKTLGIMFVVACIFVPLILCYTLWSY 360

Query: 360 WKMFGRITKEHIESNSHSLY 379
            +M+GR+ ++ IE+N H LY
Sbjct: 361 VRMWGRLNQKTIEANPHGLY 380