Pairwise Alignments

Query, 379 a.a., L,D-transpeptidase family protein from Pantoea sp. MT58

Subject, 306 a.a., peptidase from Vibrio cholerae E7946 ATCC 55056

 Score =  214 bits (544), Expect = 3e-60
 Identities = 115/292 (39%), Positives = 173/292 (59%), Gaps = 11/292 (3%)

Query: 16  AFSQSAFAVVYPLPPANSRLIGENIEITVPEDSKLPLEAFAAQYQMGLSNMLEANPGVDV 75
           A S S  A V+ LP   S ++G      V +   L     A +Y +G   ++ AN GVD 
Sbjct: 13  AVSWSINAAVFDLPIEGSSIVGNTQYHKVEKGETLA--DIAKKYDIGFLALMAANRGVDP 70

Query: 76  YLPKAGSKMIIPQQLILPDAPREGIVINSAEMRLYYYPKGSKTVVVLPIGIGELGKDTPI 135
           +LP+ G  + IP ++ILP    EGIVIN AE+RLYY+      V + P+GIG +G+DTP+
Sbjct: 71  FLPQEGFVISIPAKIILPKVAYEGIVINLAELRLYYFRPNEGKVHIFPVGIGRIGRDTPV 130

Query: 136 SWTTAVERKKDGPTWTPTKGMHADYAARGETLPAVFPAGPDNPMGLYAL---YIGRLYAI 192
              T++  K+  PTWTP   +  +Y A+G  LP V PAGP+NP+G YA+   Y    Y I
Sbjct: 131 M-QTSISSKRKYPTWTPPASIRKEYKAKGIDLPPVVPAGPENPLGDYAMRLAYGSGEYLI 189

Query: 193 HGTNANFGIGLRVSHGCVRLRADDIKWLYQNVPVGTRVQFVDQPVKATVEPDGSRYVEVH 252
           HGTN +FG+G+RVS GC+R+   DI+WLYQ V  G +V+ +++P+K  +EPD S ++EVH
Sbjct: 190 HGTNKDFGVGMRVSAGCIRMDPKDIEWLYQQVERGEKVRIINEPIKVALEPDRSVFIEVH 249

Query: 253 NPLSTTEEQFNSRELVPITLTQAVSKIVVDASVNQDQVNAAIQSRTGMPVKV 304
            PL T         +VP    + +S  + +  ++  +  AA+ ++ G+PV++
Sbjct: 250 EPL-TRSNGVKKNLVVP----EELSWWLQEHKISDAKARAAVLAQNGVPVEI 296