Pairwise Alignments

Query, 321 a.a., flagellar hook-associated protein FlgL from Pantoea sp. MT58

Subject, 397 a.a., flagellar hook-associated protein 3 from Vibrio cholerae E7946 ATCC 55056

 Score = 72.8 bits (177), Expect = 1e-17
 Identities = 66/261 (25%), Positives = 114/261 (43%), Gaps = 13/261 (4%)

Query: 29  QLSSGRRVTNPSDDPIAASRAVVLTQTQQQGKQFALARTFAEQGLSLEDNTLKGVTNGII 88
           QL+SG+++ + SD+P+A      + Q ++Q +Q+  A       L  ++  +        
Sbjct: 31  QLASGKKLLSASDNPLATHYIQNVGQQEEQLRQYLDAIVLVRNRLEHQEVIISNTEEFSD 90

Query: 89  AAQGLIVNGSTGTLSDDDRGSIATQLEGIRAQLLNQANSKDANGRYIFAGYKTDSAPFVD 148
           +A+  ++    G+LS +DR + A  L+ +    +N AN +D +G YIFAG K  + PF  
Sbjct: 91  SAKRTVMEMINGSLSPEDRVARARVLQEMANNFINLANVQDESGNYIFAGTKPKNQPFFR 150

Query: 149 TAGTGVSYTGGNEAITQKVDTSRTMTVAHTGDSIFMSITGNATKEPDGSASETNVFTMLD 208
                V+Y G +     K+  S  +   + G  +FM I           A +     +L+
Sbjct: 151 DNQGNVTYAGDDYQRKMKISNSLEIPFNNPGSKVFMEIPNPFGSYEPNYALQEGSELLLE 210

Query: 209 SAIAALKVPQDNADAATKQTFQDAMDKTNRGLGNALNNVSKVVSEIGTQLGEIDT-LNAQ 267
            A+     P D   A+ + TF D  +  N   G  L     VV     Q GE D     Q
Sbjct: 211 RAVNL--NPDDT--ASYRVTFVDMPEGKN---GYQLERNGSVV-----QAGEFDAKTGIQ 258

Query: 268 GDDRSVIYNSQMSDLVNVDLT 288
            ++ ++    Q+S    ++LT
Sbjct: 259 FEELNIQVKGQISKGDAIELT 279



 Score = 38.1 bits (87), Expect = 4e-07
 Identities = 27/139 (19%), Positives = 61/139 (43%), Gaps = 5/139 (3%)

Query: 180 DSIFMSITGNATKEPDGSASETNVFTMLDSAIAALKVPQDN-ADAATKQTFQDAMDKTNR 238
           + + + + G  +K      +    F++ D+   A++  + + +DA+        +++ + 
Sbjct: 260 EELNIQVKGQISKGDAIELTPRTTFSVFDTFRDAIRYAEGSVSDASNTAKLHQLVEEFH- 318

Query: 239 GLGNALNNVSKVVSEIGTQLGEIDTLNAQGDDRSVIYNSQMSDLVNVDLTEAASSYTMQQ 298
               A  +++K  ++IG +L  +D    Q +D  +      S   ++D  EA   +    
Sbjct: 319 ---TAFIHLNKTRTDIGARLSTLDIQEEQHEDFKISLAKSKSTFEDLDYAEAVIEFNENS 375

Query: 299 TALQASYKTFTDMSKMSLF 317
            AL+AS K F     ++LF
Sbjct: 376 RALEASQKAFGKTKDLTLF 394