Pairwise Alignments

Query, 318 a.a., 23S rRNA pseudouridine(955/2504/2580) synthase RluC from Pantoea sp. MT58

Subject, 339 a.a., pseudouridine synthase from Azospirillum brasilense Sp245

 Score =  151 bits (381), Expect = 2e-41
 Identities = 105/314 (33%), Positives = 159/314 (50%), Gaps = 12/314 (3%)

Query: 2   KTENPGVHFVAITAENAGQRIDNFLRTQLKGVPKSMIYRIVRKGEVRVNKKRVKPEYKLE 61
           + ++P V    +T++ A  R+D + +     V    + +++R G++RV+ KR +   +L 
Sbjct: 3   ENKSPSVETRTVTSDEADVRLDRWFKRHFPDVGHGYLQKLLRTGQIRVDGKRAETSTRLA 62

Query: 62  EGDEVRIPPVRVAERDEDAVSPKLAK--------VASLADAILFEDESLLVMNKPSGTAV 113
            G  +RIPP+    + E A +    K        +A+L   +LF+D  ++ +NKP+G AV
Sbjct: 63  AGQSIRIPPLADWAKPEGAAAAPAPKKPAMSDKDIAALQALVLFKDGDVIALNKPAGLAV 122

Query: 114 HGGSGLSFGVIEGLRALRPEARFL-ELVHRLDRDTSGILLVAKKRSALRSLHEQLREKGM 172
            GG+  +  +   L ALR +A+   +LVHRLD+DTSG+LL+A+   A   L EQ R + +
Sbjct: 123 QGGTNTTKHLDAMLDALRFDAKERPKLVHRLDKDTSGVLLLARNTFAASKLTEQFRGRDV 182

Query: 173 QKDYLALVRGNWPSHLKVVQAPLLKNILQSGERVVRVSSEGKASETRFKVEERF-DFATL 231
           +K Y A   G    +   +   L K     GERV     +GK + T + V E     A  
Sbjct: 183 RKIYWAATVGVPKPYQGKIDLALAKEGGPQGERVAGDEDDGKRAVTYYTVLENLGKQAAF 242

Query: 232 VKASPVTGRTHQIRVHTLHAGHPIAFDDRYGERDFDSQLASTGLKRLFLHAAALTFTHP- 290
           V   P TGRTHQ+RVH    G PI  D +Y  +      A    K+L LHA  L   HP 
Sbjct: 243 VAMWPRTGRTHQLRVHMNAIGTPILGDGKYAGQGAHLPGAEI-QKKLHLHARRLILPHPR 301

Query: 291 GTGEVMRVEAPLDD 304
           G   ++ V APL D
Sbjct: 302 GGNRMIDVTAPLPD 315