Pairwise Alignments

Query, 318 a.a., 23S rRNA pseudouridine(955/2504/2580) synthase RluC from Pantoea sp. MT58

Subject, 333 a.a., pseudouridine synthase from Cupriavidus basilensis FW507-4G11

 Score =  295 bits (754), Expect = 1e-84
 Identities = 168/317 (52%), Positives = 211/317 (66%), Gaps = 8/317 (2%)

Query: 6   PGVHFVAITAENAGQRIDNFLRTQLKGVPKSMIYRIVRKGEVRVNKKRVKPEYKLEEGDE 65
           P V +V I  E  GQRIDNFL    KGVPKS +YRI+R GEVRVNK RV   Y+L+ GD 
Sbjct: 19  PQVAYVTIGDEADGQRIDNFLLKLSKGVPKSHVYRILRSGEVRVNKGRVDATYRLQLGDV 78

Query: 66  VRIPPVRVAERDEDAVSPKLAKVASLADAILFEDESLLVMNKPSGTAVHGGSGLSFGVIE 125
           VRIPP+RVA    DA   K    AS    ++FEDE LLV+NKP+G AVHGGSG++FGVIE
Sbjct: 79  VRIPPMRVAASAPDA--GKFVPPASFP--VVFEDEYLLVINKPAGVAVHGGSGVAFGVIE 134

Query: 126 GLRALRPEARFLELVHRLDRDTSGILLVAKKRSALRSLHEQLREKGMQKDYLALVRGNWP 185
            LR  RP+ARFLELVHRLDR+TSG+L++AKKR+AL +LHEQ+R   + K Y A V G++ 
Sbjct: 135 QLRRARPQARFLELVHRLDRETSGLLVLAKKRTALVNLHEQMRGSALDKRYFACVAGHFE 194

Query: 186 SHLKVVQAPLLKNILQSGERVVRVSSEGKASETRFKVEERFDFATLVKASPVTGRTHQIR 245
           +  + V+ PL K     GER VRV  +G AS T F   E     TL++A   TGRTHQIR
Sbjct: 195 NARQHVKFPLYKYTTPEGERRVRVQEDGIASHTVFNRLEVMPGYTLLEAELKTGRTHQIR 254

Query: 246 VHTLHAGHPIAFDDRYGERDFDSQL----ASTGLKRLFLHAAALTFTHPGTGEVMRVEAP 301
           VH  H+G PI  D++YG+   +  L    A+ GLKR+FLHA +LTFTHP +GE+  V AP
Sbjct: 255 VHLAHSGFPILGDEKYGDYALNKALARSGANPGLKRMFLHAHSLTFTHPISGEITTVVAP 314

Query: 302 LDDGLKQCLNKLRQMKA 318
           +    +  L + R  +A
Sbjct: 315 MPPECEAFLQQARNQRA 331