Pairwise Alignments

Query, 318 a.a., 23S rRNA pseudouridine(955/2504/2580) synthase RluC from Pantoea sp. MT58

Subject, 341 a.a., ribosomal large subunit pseudouridine synthase C from Burkholderia phytofirmans PsJN

 Score =  294 bits (752), Expect = 2e-84
 Identities = 164/317 (51%), Positives = 209/317 (65%), Gaps = 10/317 (3%)

Query: 8   VHFVAITAENAGQRIDNFLRTQLKGVPKSMIYRIVRKGEVRVNKKRVKPEYKLEEGDEVR 67
           V  + I    AGQRIDNFL    KGVPKS IYRI+R GEVRVNK R+  +Y+LE GD VR
Sbjct: 17  VSMIEIDDSAAGQRIDNFLLRVCKGVPKSHIYRILRSGEVRVNKGRIDAQYRLELGDLVR 76

Query: 68  IPPVRVAERDEDAVSPKLAKVASLADAILFEDESLLVMNKPSGTAVHGGSGLSFGVIEGL 127
           +PP+RVA+  E A     A V +    I+FEDE LLV++KP+G AVHGGSG++FGVIE +
Sbjct: 77  VPPIRVAQPSETATQ---APVPAAHFKIIFEDEHLLVIDKPAGVAVHGGSGVAFGVIEQM 133

Query: 128 RALRPEARFLELVHRLDRDTSGILLVAKKRSALRSLHEQLREKGMQKDYLALVRGNWPS- 186
           R  RP+A+FLELVHRLDR+TSGIL++AKKRSAL +LHEQ+RE  M K Y A V G+W S 
Sbjct: 134 REARPQAKFLELVHRLDRETSGILMLAKKRSALVNLHEQIRENKMDKRYYACVHGDWASD 193

Query: 187 --HLKVVQAPLLKNILQSGERVVRVSSEGKASETRFKVEERFDFATLVKASPVTGRTHQI 244
               + V+ PL K +   GER VRV  +G AS T F + +R+    L++A   TGRTHQI
Sbjct: 194 WGRRRAVKEPLHKYLTADGERRVRVQPDGLASHTVFNLIDRWPEYALLEAELKTGRTHQI 253

Query: 245 RVHTLHAGHPIAFDDRYGERDFDSQL----ASTGLKRLFLHAAALTFTHPGTGEVMRVEA 300
           RVH  H   PI  D +YG+   +  L    A  GLKR+FLHA  L  THP TG  ++ EA
Sbjct: 254 RVHLQHLELPIVGDAKYGDFALNKALARANAKPGLKRMFLHAYRLKLTHPATGAPLQFEA 313

Query: 301 PLDDGLKQCLNKLRQMK 317
           PL    +  + +L +++
Sbjct: 314 PLPAECRSFIAQLNELR 330