Pairwise Alignments

Query, 223 a.a., 23S rRNA pseudouridine(2457) synthase RluE from Pantoea sp. MT58

Subject, 243 a.a., ribosomal large subunit pseudouridine synthase B from Synechococcus elongatus PCC 7942

 Score =  111 bits (278), Expect = 1e-29
 Identities = 77/206 (37%), Positives = 102/206 (49%), Gaps = 27/206 (13%)

Query: 17  RIHQDKRFSRPTRDARRPPARPAMPRRVILFNKPFDVLPQFTDEAGRRTLKDFVSVA--- 73
           RIH D +  RP     RP AR       +L +KP  V+    D   RRT+ D V      
Sbjct: 48  RIHLDGKRLRPKH---RPEAR------YLLLHKPVGVVSTCRDPQRRRTVIDLVDPEFRP 98

Query: 74  EVYAAGRLDRDSEGLMVLTNDGALQAALTQPGKRTGKVYYVQVEGEPQEADLQPLRDGVN 133
            ++  GRLD DS GL++L NDG L   ++ P     K Y V VEG P  + L+  R GV 
Sbjct: 99  GLHPVGRLDTDSSGLLLLCNDGELTYQISHPRFHIEKTYRVWVEGHPPASVLEHWRSGVW 158

Query: 134 LKDGMTLPAGIEKVPEPQWLWPRQPPIRERKNIPTQWLKVTLYEGRNRQVRRMTAHIGFP 193
           L D  TLPAG+  + +                  +  L+V L+EGRNRQ+RR+   +G P
Sbjct: 159 LDDYQTLPAGVRILHD---------------RAESTLLEVILHEGRNRQIRRVAEQLGHP 203

Query: 194 TLRLIRYAMGQYSLDDLAPGAWRELS 219
            LRL R A+G   L  L PG +R L+
Sbjct: 204 VLRLTRVAIGPLRLGSLQPGEYRSLT 229