Pairwise Alignments

Query, 869 a.a., type VI secretion system ATPase TssH from Pantoea sp. MT58

Subject, 862 a.a., endopeptidase Clp ATP-binding chain B (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  555 bits (1431), Expect = e-162
 Identities = 335/852 (39%), Positives = 492/852 (57%), Gaps = 52/852 (6%)

Query: 20  SLESATAFCKLRGNPYVELVHWLHQLMQQQDGDLQQVITHFSLDEKALTQDIVAALDRLP 79
           +++ A    + RG   +E  H LH +M+  +     +     ++ + +   +   ++ LP
Sbjct: 13  AVQEAVNLVQSRGQQAIEPAHILHGVMKVGENVTNFIFQKLGMNGQQVALVVDKQIESLP 72

Query: 80  RGASAVSDLSEHIDSAVERAWVYASLKYGATRIRGGHLLIGMLKTFNLASVLKGISGQFS 139
           + +     LS   +  +++A  Y S + G   +   H+L+ +L   +  S +   +G   
Sbjct: 73  KVSGGEPYLSRESNEVLQKATQY-SKEMGDEFVSLEHILLALLTVKSTVSTILKDAGMTE 131

Query: 140 RVNADAL--LADFDTLLSNSKEAQQAMSAPADAAGAPPAAGGTTLEQYGQDLTARAREGR 197
           +   +A+  L   + + S S E                     +LE+Y  +L   AR G+
Sbjct: 132 KELRNAINELRKGEKVTSQSSEDNYQ-----------------SLEKYAINLNEAARSGK 174

Query: 198 IDPVTGRDDEIRQMVDILMRRRQNNPLLTGEAGVGKTAVVEGLALRIAAGDVPAPLRDVQ 257
           +DPV GRD+EIR+++ IL RR +NNP+L GE G GKTA+VEGLA RI  GDVP  L++ Q
Sbjct: 175 LDPVIGRDEEIRRVLQILSRRTKNNPILIGEPGTGKTAIVEGLAHRILRGDVPENLKNKQ 234

Query: 258 LWLLDIGLLQAGAGMKGEFEARLQALINEVQSSPTPIVLFVDEIHTLVGAGGQQGTGDAA 317
           ++ LD+G L AGA  KGEFE RL++++NEV+ S   I+LF+DEIHTLVGAG  +G  DAA
Sbjct: 235 VYSLDMGALVAGAKYKGEFEERLKSVVNEVKKSEGDIILFIDEIHTLVGAGKGEGAMDAA 294

Query: 318 NLLKPALARGQLRTIGATTWAEYKKYIEKDPALTRRFQTVQVQEPDEAKAILMLRSTVSA 377
           N+LKPALARG+LR+IGATT  EY+KY EKD AL RRFQ VQV EPD    I +LR     
Sbjct: 295 NILKPALARGELRSIGATTLDEYQKYFEKDKALERRFQIVQVDEPDTLSTISILRGLKER 354

Query: 378 LEKHHRVLLLDDAVTAAVKLSHRYIPARQLPDKAVALLDTACARVAVSQGAQPAALEDCL 437
            E HH V + DDA+ AAV+LS RYI  R LPDKA+ L+D A A++ +   + P  L++  
Sbjct: 355 YENHHHVRIKDDAIIAAVELSSRYITDRFLPDKAIDLMDEAAAKLRMEVDSVPEELDEIS 414

Query: 438 HRLAALEIEAEIIEREIRVGLGDVTRQQAIAAERTALETERDALQQRWLQEREL------ 491
            ++  LEIE E I+RE      D  + + I  E   L+    + + +W  E+ L      
Sbjct: 415 RKIKQLEIEREAIKRE-----NDKPKLEIIGKELAELKEVEKSFKAKWQSEKTLMDKIQQ 469

Query: 492 ----VETLIALRARCVTEED------------PALREQRDATQQQLTALQGDSPLLFAAV 535
               +E L     +   E D             AL ++ + TQ++L  +QGD  ++   V
Sbjct: 470 NKVEIENLKFEAEKAEREGDYGKVAEIRYGKLQALDKEIEDTQEKLRGMQGDKAMIKEEV 529

Query: 536 DAGVVAAVVSDWTGIPLGRMVKNEIDAVLNLADTLNQRVIGQRHGLELIAKRVRTTRARL 595
           DA  +A VVS WTGIP+ +M+++E D +L+L D L+QRVIGQ   +E +A  VR +RA L
Sbjct: 530 DAEDIADVVSRWTGIPVSKMMQSEKDKLLHLEDELHQRVIGQDEAIEAVADAVRRSRAGL 589

Query: 596 DNPNKPAGVFMLCGPSGVGKTETALALAESLYGGEQNIITINMSEFQEAHTVSTLKGAPP 655
            +P +P G F+  G +GVGKTE A ALAE L+  E  +  I+MSE+QE H+VS L GAPP
Sbjct: 590 QDPKRPIGSFIFLGTTGVGKTELAKALAEFLFDDESMMTRIDMSEYQEKHSVSRLVGAPP 649

Query: 656 GYVGYGEGGVLTEAVRRRPYSVVLLDEIEKAHPDVHELFFQVFDKGWMEDGEGRHIDFRN 715
           GYVGY EGG LTEA+RR+PYSVVL DEIEKAHPDV  +  QV D G + D +GR ++F+N
Sbjct: 650 GYVGYDEGGQLTEAIRRKPYSVVLFDEIEKAHPDVFNILLQVLDDGRLTDNKGRVVNFKN 709

Query: 716 TIIILTSNVGTQLISAMCADPELMPDPDALSTALRK---PLLEVFPPALLGRL-LVVPYY 771
           TIII+TSN+G+  I +           + +    ++    L +   P  L R+   + + 
Sbjct: 710 TIIIMTSNMGSSYIQSQMEKLSGSNKEEVIEETKKEVMNMLKKNIRPEFLNRIDETIMFL 769

Query: 772 PLSDEMLAEIVRLQLARIVRRLADNHGIEAQIDESVVSQIVQRCTEVESGGRMVDAILTN 831
           PL++  + +IV LQ+  + + LA+N G+E ++ ++ ++ + Q   + E G R V   +  
Sbjct: 770 PLTETEIRQIVLLQIKGVQKMLAEN-GVELEMTDAALNFLSQVGYDPEFGARPVKRAIQR 828

Query: 832 TLLPQMSQILLS 843
            LL  +S+ LLS
Sbjct: 829 YLLNDLSKKLLS 840