Pairwise Alignments

Query, 363 a.a., sodium-potassium/proton antiporter ChaA from Pantoea sp. MT58

Subject, 365 a.a., sodium/calcium exchanger membrane region (RefSeq) from Shewanella sp. ANA-3

 Score =  311 bits (798), Expect = 1e-89
 Identities = 170/356 (47%), Positives = 239/356 (67%), Gaps = 13/356 (3%)

Query: 11  EFSLIFPLITLGILYFFGAN-----TAFPVVVGINLVALIAILSSAFSVVRHADVLAHRL 65
           EF+L+  ++TL      G +     TA    + ++L  L  +  + FSVVRH+D LA +L
Sbjct: 8   EFALLLGILTLVFFKTGGDSLLADGTALSTYIPVSLTLLGVVTWAIFSVVRHSDALAIKL 67

Query: 66  GEPYGSLILSLSVVILEVSLISALMATGDAAPGLMRDTLYSIVMIVTGGLVGFALLLGGN 125
           G+PYG+LIL+LSV+ LEV +IS++M TG+  P + RDT++++VM++  GLVGF LLLGG 
Sbjct: 68  GDPYGTLILTLSVISLEVVMISSVMLTGEPNPVMARDTMFAVVMLIINGLVGFTLLLGGW 127

Query: 126 KFATQYVNLAGVKQYLIAIFPLAILVLVFPNALPGG---NFSVTQALLIAAISAAMYGVF 182
           ++ TQ+ NL GVK YL+AI PLA+L LV PN   GG   + S   + ++  IS  +YG+F
Sbjct: 128 RYHTQHFNLDGVKSYLVAIIPLALLCLVLPNFTEGGTIGSMSKPMSWMLIIISILLYGIF 187

Query: 183 LLIQTKTHQSLFVYEHEDESDDGDPHHGKPSAHSSVWHTIWLIVHLIAVIAVTKMNANTL 242
           L+IQTK+H   FV   + + +D + HHG     S+++HT+ LI +L+ VI + K  A  +
Sbjct: 188 LVIQTKSHSHFFV---DADHEDHEEHHG--ILRSNIYHTVLLIGYLLVVILLAKTLAMPI 242

Query: 243 ESLLTDLNAPAQFTGFLVALLILSPEGLGAIKAVLMNQVQRAMNLFFGSVLATISLTVPA 302
              +  L AP    GF+VA LILSPE +G  KA L NQ+QRAMNL+FGSVLATI+LTVPA
Sbjct: 243 NYSVASLGAPPALGGFIVACLILSPEAVGGFKAALNNQLQRAMNLYFGSVLATIALTVPA 302

Query: 303 VTIIATLTGQELIFGLEPPQMVIMMASLILCQLSFSTGRTNVLNGAAHLALFIGYL 358
           V II +L  QE+  GL    MV++  SL++C++SFS+GRTN L+GA H+ LFI YL
Sbjct: 303 VLIIGSLIDQEVHLGLSAADMVLLATSLMVCKVSFSSGRTNALHGATHIVLFIVYL 358