Pairwise Alignments

Query, 311 a.a., D-ribose ABC transporter substrate-binding protein from Pantoea sp. MT58

Subject, 317 a.a., periplasmic binding protein/LacI transcriptional regulator from Klebsiella michiganensis M5al

 Score =  108 bits (270), Expect = 2e-28
 Identities = 80/262 (30%), Positives = 127/262 (48%), Gaps = 15/262 (5%)

Query: 3   KRTLLCTAVAACLVSQ-----AAFAAEKGT-----IMILVNSLDNPYYASEAKGANLKAQ 52
           ++  L  AVAA + +      AA AA + +     I ++V  + NP++++  + A   A 
Sbjct: 5   RKAWLAIAVAAVITTMTGLAPAASAAPQESKKIARIGLMVQDMSNPFFSAMERNAKQAAA 64

Query: 53  ELGYKTTVLSHGEDVKKQSELIDAAIGKKVQGIVLDNADSTASVAAIKKAKDAGIPVVLI 112
           ++G    V     D+  Q+  IDA I +KV  I++   D +    AI++AK AGI V+ +
Sbjct: 65  KIGATLNVQDAQVDLANQNTQIDAFIQQKVDLIIISAVDESGIEPAIQRAKAAGIIVIAV 124

Query: 113 NREIPVDDVALAQITHNNFQAGSDVANVFVEKMGEKGKYAELACNLADNNCVTRSKSFHQ 172
           +      D A   I  N  QAG         +MG KGK   L         + R K    
Sbjct: 125 DTPAKGADAA---IMTNAIQAGETSCEYLFSQMGGKGKVL-LVDGTPIQTIIDRIKGCKN 180

Query: 173 VLDQYPDMQSVARQDAKGTLIDGKRIMDSILQAHPDVKGVICGNGPVALGAIAALKAAGR 232
           V  +YPD++ V +Q ++     G  +   +L A+PDV G+   N P ALGA+ A++ AG+
Sbjct: 181 VAQKYPDIKIVGQQASRNDRASGLMVTTDMLTANPDVSGIFGMNDPSALGAVLAVEQAGK 240

Query: 233 NDVI-VVGIDGSNDERDAVKAG 253
              I V G+DGS +  + +K G
Sbjct: 241 AGAINVTGVDGSPEAVEELKRG 262