Pairwise Alignments

Query, 311 a.a., D-ribose ABC transporter substrate-binding protein from Pantoea sp. MT58

Subject, 314 a.a., D-ribose ABC transporter substrate-binding protein from Bifidobacterium breve UCC2003

 Score =  111 bits (277), Expect = 3e-29
 Identities = 81/301 (26%), Positives = 139/301 (46%), Gaps = 9/301 (2%)

Query: 7   LCTAVAACLVSQAAFAAEKGTIMILVNSLDNPYYASEAKGANLKAQELGYKTTVLSHGED 66
           L    AAC  S ++   +K  + +LV++L+NP++     GA   A++LG    V     D
Sbjct: 22  LMAGTAAC-GSTSSSGGDK--VALLVSTLNNPFFVDLRDGAQAAAKDLGVDLMVSDAQND 78

Query: 67  VKKQSELIDAAIGKKVQGIVLDNADSTASVAAIKKAKDAGIPVVLINREIPVDDVALAQI 126
              Q      A  +  + ++++  DS A+  A+     + +PV+ ++R +  +DV  + I
Sbjct: 79  SSTQQNQAQNAQSQGAKAVIINPVDSDAASPAVAPLLSSSLPVISVDRSVTGEDVT-SHI 137

Query: 127 THNNFQAGSDVANVFVEKMGEKGKYAELACNLADNNCVTRSKSFHQVLDQYPDMQSVARQ 186
             +N   G+  A+   + +GEKGK   L       +   R   F + + +Y  ++ VA Q
Sbjct: 138 ASDNVAGGAQAADELAKAVGEKGKVIILQGTPGAASTRDRGDGFKKEIKKYSGIEVVAEQ 197

Query: 187 DAKGTLIDGKRIMDSILQAHPDVKGVICGNGPVALGAIAALKAAGRNDVIVVGIDGSNDE 246
            A     +   +  +++Q++PDV G+   N  +ALGAI +L +    DV + G DG+ D 
Sbjct: 198 TANFDRAEALDVTTNLMQSNPDVVGIYAENDEMALGAIQSLGSKAGADVKIFGFDGTEDG 257

Query: 247 RDAVKAGTLKATVMLQAQAIAAEGVTDLDNFIQKGVKPEKQRVMFRGILITPENAKNVQD 306
             AV  GT+  T+  Q + +  + V      I KG   EK       I +      NV D
Sbjct: 258 LKAVSNGTMVGTIAQQPKELGKKAVEAAVKAI-KGESVEKT----ESIEVKTVTKGNVAD 312

Query: 307 F 307
           F
Sbjct: 313 F 313