Pairwise Alignments

Query, 311 a.a., D-ribose ABC transporter substrate-binding protein from Pantoea sp. MT58

Subject, 315 a.a., LacI family transcriptional regulator from Burkholderia phytofirmans PsJN

 Score =  118 bits (296), Expect = 2e-31
 Identities = 88/315 (27%), Positives = 158/315 (50%), Gaps = 13/315 (4%)

Query: 1   MKKRTLLCTAVAACLVSQAAFAAEKGTIMILVNSLDNPYYASEAKGANLK-AQELGYKTT 59
           MKK ++L  A A C +  A   A  G I ++V + ++ Y+ +  KGA    A   GY  T
Sbjct: 1   MKKLSVLAAAAAMCAMFSAYAQAAGGEIAVIVKTANSNYWQNVQKGATAAMADAKGYTMT 60

Query: 60  VLSHGED--VKKQSELIDAAIGKKVQGIVLDNADSTASVAAIKKAKDAGIPVVLINREIP 117
                 +  +  +  +++ A+ + V GIVL  +D  A V A+KKA +A IPVVLI+  + 
Sbjct: 61  FQGPAAESAIADEVNMVENAVNRHVAGIVLAPSDPDALVPAMKKAWEAHIPVVLIDSTVS 120

Query: 118 VDDVALAQ--ITHNNFQAGSDVANVFVEKMGEKGKYAELACNLADNNCVTRSKSFHQVLD 175
                  Q  ++ +N +AG   A   ++++G+ GK A ++      + + R   F + + 
Sbjct: 121 DAGKQYYQSFLSTDNTKAGELCAQAMIDRVGQTGKVAIMSYVPGAGSEIGRVGGFRKYIT 180

Query: 176 QYPDMQSVARQDAKGTLIDGKRIMDSILQAHPDVKGVICGNGPVALGAIAALKAAGRN-D 234
            +  +Q V    ++  +         +L A+PD+KG+   N P A+G   AL  +G++  
Sbjct: 181 AHSKLQVVGPFYSQSQMATALNQTTDVLSANPDLKGIFGANEPTAVGMGRALAQSGKSGK 240

Query: 235 VIVVGIDGSNDERDAVKAGTLKATVMLQAQAIAAEGVTDLDNFIQKGVKPEKQRVMFRGI 294
           VI +G DG+ D +  V+ GT++A  +  +  +  +G+  L N I++  KP  ++V    +
Sbjct: 241 VIAIGFDGNQDLQGFVRDGTIQAIAVQSSYQMGYKGIQTLVNVIER--KPVSKQVDTGVM 298

Query: 295 LITPEN-----AKNV 304
           ++  +N     AKNV
Sbjct: 299 MVEKQNLDSSEAKNV 313