Pairwise Alignments

Query, 353 a.a., ABC transporter ATP-binding protein from Pantoea sp. MT58

Subject, 463 a.a., spermidine/putrescine transport ATP-binding protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  244 bits (624), Expect = 3e-69
 Identities = 139/306 (45%), Positives = 189/306 (61%), Gaps = 8/306 (2%)

Query: 13  HVAKRFAGFTAVPDLSLTVEPGTLVTLLGPSGCGKTTTLRLLAGLEHPTSGRILIGGKEV 72
           HV+K F   TA+ D++L V+ G  VT+LGPSGCGKTT LRL+AG +  + G I I GKE+
Sbjct: 14  HVSKFFGDKTALDDVTLNVKKGEFVTILGPSGCGKTTLLRLIAGFQTASEGEIRISGKEI 73

Query: 73  THLPANERDVAMVFQSYALFPHMNAIDNILYGLLSSGMNKREAQDRAREGLKLVGLESQG 132
           T  P ++R V  VFQ YALFPH+N  DNI +GL      K+    + +  LK+VG+    
Sbjct: 74  TQTPPHKRPVNTVFQKYALFPHLNVYDNIAFGLKLKKTPKQTIGKKVKAALKMVGMTDYE 133

Query: 133 ERLPSELSGGQQQRIAVARALVLEPQVLLLDEPLSNLDERLRRRVRTDIRDLQQRLGFTA 192
            R    LSGGQQQR+A+ARA+V EP+VLLLDEPL+ LD ++R+ ++ +++++ + LG T 
Sbjct: 134 YRDVDSLSGGQQQRVAIARAIVNEPEVLLLDEPLAALDLKMRKDMQMELKEMHKSLGITF 193

Query: 193 VYVTHDQEEALAVSDKIIVMKEGDIAQQGAPETLYHSPNSVFIADFMGEANILPCEVEQA 252
           VYVTHDQEEAL +SD I+VM EG I Q G P  +Y+ P + F+ADF+GE+NIL       
Sbjct: 194 VYVTHDQEEALTLSDTIVVMSEGKIQQIGTPIDIYNEPINSFVADFIGESNIL----NGT 249

Query: 253 DADDALVRLGNQRFRV--RGAGAKTGSAQLAVRPQFITLSGDGQGA-LQGEVIHSTWLGD 309
              D LVR     F     G G  T    + +RP+ + +    + A L G V  S + G 
Sbjct: 250 MIHDKLVRFCGTEFECVDEGFGENT-PVDVVIRPEDLYIFPVSEMAQLTGVVQTSIFKGV 308

Query: 310 HIEYEV 315
           H E  V
Sbjct: 309 HYEMTV 314