Pairwise Alignments

Query, 238 a.a., ABC transporter permease from Pantoea sp. MT58

Subject, 245 a.a., choline uptake ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  144 bits (363), Expect = 2e-39
 Identities = 84/243 (34%), Positives = 134/243 (55%), Gaps = 12/243 (4%)

Query: 6   LAQRAGLAVLAVVAVIAALIWGLGWDQLVARKV------------DLLYLGQQHLFLVFW 53
           +A    L  L V+AV+ A +    W + + + +             L +L   HL  VF 
Sbjct: 1   MATLPNLFRLTVLAVLLAFLVQPAWFEPLLKPLVQENAPAVYNQGSLFWLTVLHLRTVFV 60

Query: 54  SMLFALLVGIPSGILLSRPFARRWAEYVMQIFNVGNTLPPLAVLALAMVIIGIGDRPALI 113
           + + A +V +   I+++R     +      + N+G T PP+AVLALA+ I G G++P LI
Sbjct: 61  ATVAATIVAVSLAIIVTRKAGAEFLPLSRSLVNIGQTFPPVAVLALAVPIYGFGEKPTLI 120

Query: 114 ALFLASLLPIVRNTFSGLSAVPPSLIEAANGIGMTKWQRLRQVELPNALPVILAGVRIAT 173
           ALFL  LLPI  N  +GL+ +PP+++EAA G GMT  QRL ++ELP ALPVIL G+R++ 
Sbjct: 121 ALFLYGLLPIFENALTGLTTLPPTVMEAARGAGMTGRQRLFRIELPLALPVILTGIRLSV 180

Query: 174 AINVGTAPLAFLIGASSFGELIFPGIYLNDFPTLILGAVATALVALVLDMLLAALGRFLS 233
            I++ TA +   + A + GE+I  G+  N+   ++ G +    +A+++   L  L R  +
Sbjct: 181 VISLATATIGSTVAARTLGEVIIAGLQSNNLAFVLQGGLIVGALAVLIHDALQGLERAFA 240

Query: 234 PHA 236
             A
Sbjct: 241 GRA 243