Pairwise Alignments

Query, 138 a.a., DNA-binding transcriptional regulator H-NS from Pantoea sp. MT58

Subject, 130 a.a., histone family protein nucleoid-structuring protein H-NS (RefSeq) from Shewanella loihica PV-4

 Score = 84.0 bits (206), Expect = 8e-22
 Identities = 51/136 (37%), Positives = 81/136 (59%), Gaps = 6/136 (4%)

Query: 1   MSEALKVLNNIRTLRAQAREYSVETLEEMLEKLDVVVKERREEESHFQAENEERTRKLNQ 60
           MSE L +L + R  +A  ++ SVE L+++  KL+ ++ E+ ++     A   ER  K+ +
Sbjct: 1   MSEFLDILTHGRRFKAAVKDLSVEDLKDVAVKLEKIITEKEKQAEEESAVMAERNAKIEE 60

Query: 61  YREMLLADGIDPNELINAQAATPRTAAKAKRSVRPAKYAYTDEKGESRTWTGQGRTPAVI 120
            R+ + A G+  ++L    AA P   A  KR+ RP KY   +  GE+ TWTGQGRTP V 
Sbjct: 61  IRQQMEAVGLSIDDL-GTVAAKP---APKKRAPRPPKYK-IEVNGETITWTGQGRTPTVF 115

Query: 121 KIALEEQGKTLDDFLL 136
           K  L ++G++L+DFL+
Sbjct: 116 KNEL-DKGRSLEDFLI 130