Pairwise Alignments

Query, 560 a.a., choline dehydrogenase from Pantoea sp. MT58

Subject, 543 a.a., choline dehydrogenase from Herbaspirillum seropedicae SmR1

 Score =  372 bits (955), Expect = e-107
 Identities = 218/539 (40%), Positives = 293/539 (54%), Gaps = 16/539 (2%)

Query: 3   YDYIVIGAGSAGNVLATRLTEESNVSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRYNW 62
           +DY+++G GSAG  LA RL+E+  +SV LLEAGG       RT        P  GK  NW
Sbjct: 3   FDYVIVGGGSAGATLAARLSEDPRISVCLLEAGGQGDSLLVRTPAAVVAMLPGYGKLNNW 62

Query: 63  AYETEPEPYMNNRRMECGRGKGLGGSSLINGMCYIRGNAMDLDNWASEPGLENWSYLDCL 122
           A +T P+P +N RR    RG+ LGGSS IN M Y+RG   D D WA + G   W +   L
Sbjct: 63  ALQTTPQPGLNGRRGYQPRGRALGGSSAINAMLYVRGQRQDYDGWA-QAGCPGWDWESVL 121

Query: 123 PYYRKAETRDIGPNDFHGGDGPVCVATPKAGNNVLFEAMIEAGVQAGYPRTDDLNGYQQE 182
           PY+++AE    G + +HG  GP+ V+       +   A IEAG   G+    D N    E
Sbjct: 122 PYFKRAENNVRGADAWHGASGPLQVSEQNRPRPIT-RAFIEAGQARGHRLCQDFNTGDNE 180

Query: 183 GFGPMDRTV--TP--NGRRSSTARGYLDMAKG-RANLKIITHATTDRIVFDGKRAVGVEY 237
           G G    T   TP   G R S A  YL    G R NL ++      R++F+GKRA+GV Y
Sbjct: 181 GVGLYQVTQFHTPAHRGERCSAAAAYLHPVMGQRPNLSVLRQVRAQRLLFEGKRAIGVAY 240

Query: 238 LQGDSNTINKVTARREVLLCAGAIASPQILQRSGVGSPELLKQFDIPLVHDLPGVGENLQ 297
            Q   +   +V A REV++ AGA  SPQ+LQ SGVG  + +    I L H LPGVG+NLQ
Sbjct: 241 RQQQGDA--QVRAAREVIIAAGAFGSPQLLQLSGVGRSDDILPHGIALHHPLPGVGQNLQ 298

Query: 298 DHLEMYLQYECKEP----VSIYPALKWWNQPKIGAEWMFNGTGIGASNQFEAGGFIRSRE 353
           DHL+    +  ++     + +   L+   Q      W  +G G+ A+   E   F+++R 
Sbjct: 299 DHLDFTQGWTTRDTDNFGLGVVGGLRLLGQL---LPWKRHGEGLIATPFAEGAAFLKTRP 355

Query: 354 EFSWPNIQYHFLPVAINYNGSNAVDAHGFQCHVGSMRSPSRGHVRLKSRDPRRHPAILFN 413
           E   P+IQ HF    ++ +       +GF  H+  +R  SRG V L+S DP   P I   
Sbjct: 356 ELDRPDIQLHFCIAIVDDHARKLHAGYGFSLHMCMLRPHSRGRVGLQSADPMADPLIDPG 415

Query: 414 YMSHEQDWHEFRDAIRITRQIINQPALDKYRGREISPGLDCQTDEQLDEFVRNHGETAYH 473
           Y+S  +D     D  R+ RQI+    L  Y  RE+  G D   D Q +  +R+  +T YH
Sbjct: 416 YLSDPRDLATMIDGARMARQIVMTEPLRHYCRRELFGGRDDMDDAQWESMIRHRADTIYH 475

Query: 474 PCGTCKMGNDPMSVVDGEGRVHGLEGLRVVDASIMPLIITGNLNATTIMIGEKIADKIR 532
           P GTC+MG D M+VVD + RVHGL+GLRVVDAS+MP +++GN NA TIMI EK AD IR
Sbjct: 476 PAGTCRMGEDAMAVVDAQLRVHGLQGLRVVDASVMPTLVSGNTNAPTIMIAEKAADMIR 534