Pairwise Alignments

Query, 204 a.a., Holliday junction branch migration protein RuvA from Pantoea sp. MT58

Subject, 201 a.a., Holliday junction DNA helicase, RuvA subunit from Pseudomonas stutzeri RCH2

 Score =  210 bits (534), Expect = 2e-59
 Identities = 104/204 (50%), Positives = 145/204 (71%), Gaps = 3/204 (1%)

Query: 1   MIGRLRGNILEKQPPLVLLEAHGVGYEIYMPMTCFYELPELQHEAVIFTHFVVREDAQLL 60
           MIGRLRG + EKQPP ++L+ +G+GYE+ +PMT  Y LP +     + TH VVREDAQLL
Sbjct: 1   MIGRLRGTLAEKQPPHLILDVNGIGYEVEVPMTTLYRLPAVGEPLTLHTHLVVREDAQLL 60

Query: 61  FGFNSKQERALFRELIKVNGVGPKLALAILSGMSAQQFVTAVEKEEIASLVKLPGVGKKT 120
           +GF  K+ER LFRELI++NGVGPKLALA++SG+   + V  V+ ++ + LV++PGVGKKT
Sbjct: 61  YGFAEKRERELFRELIRLNGVGPKLALALMSGLEVDELVRCVQAQDTSVLVRIPGVGKKT 120

Query: 121 AERLVVEMKDRFKGMHGDLFGGDSAFTLTTPSAEPETNDAESEAVAALVSLGYKPQEASR 180
           AERL+VE+KDRFK    +     + F +  P ++     AE++AV+AL+SLG+KPQEASR
Sbjct: 121 AERLLVELKDRFKAW--EAMPAIATF-VVEPGSKTAVTSAENDAVSALISLGFKPQEASR 177

Query: 181 MISKVGRPDADCETLIREALRAAI 204
            +S +   D   E +IR AL+  +
Sbjct: 178 AVSAIQEDDLSSEEMIRRALKGMV 201