Pairwise Alignments

Query, 243 a.a., flagellar type III secretion system pore protein FliP from Pantoea sp. MT58

Subject, 251 a.a., flagellar biosynthetic protein FliP from Pseudomonas stutzeri RCH2

 Score =  221 bits (564), Expect = 8e-63
 Identities = 122/246 (49%), Positives = 165/246 (67%), Gaps = 7/246 (2%)

Query: 1   MRRLLPLLPLLL--LAPVAHAQLPG----LVSHSLPNGGQSWSLPVQTLVFITALTFIPA 54
           +RR L LL LLL  L P+A AQ  G    L + +    GQ +S+ +Q L+ +T L F+PA
Sbjct: 3   LRRGLSLLGLLLIGLMPLA-AQAAGGEITLFNLNDTENGQEFSVKLQILIIMTLLGFLPA 61

Query: 55  VLLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLSLFLTFFIMAPTFDKIYQDAYLPF 114
           +L+MMT FTR IIV  +LR A+G   +PPNQVL+G++L +T  +M P + +I+  AY PF
Sbjct: 62  MLMMMTCFTRFIIVLAILRQAIGLQQSPPNQVLIGIALIVTLLVMRPVWQEIHSQAYEPF 121

Query: 115 SQDKISMDVAIDKGAQPLREFMLRQTREADLALFARLANTAPIAGPEAVPMRILLPAYVT 174
             D+I+++ A+D     L  FML QT +  L     LA        + +   +LLPA+V 
Sbjct: 122 QNDEITLEQALDSAKGSLAGFMLAQTNKNSLETMVALAGEQLPENLDELDFSLLLPAFVL 181

Query: 175 SELKTAFQIGFTVFIPFLIIDLVVASVLMALGMMMVPPASIALPFKLMLFVLVDGWQLLV 234
           SELKTAFQ+GF +F+PFL+IDLVVASVLMA+GMMM+ P  I+LPFKLM+FVLVDGW LL+
Sbjct: 182 SELKTAFQLGFMIFVPFLVIDLVVASVLMAMGMMMLSPMMISLPFKLMVFVLVDGWALLM 241

Query: 235 GSLAQS 240
           G+L  S
Sbjct: 242 GTLTTS 247