Pairwise Alignments

Query, 261 a.a., flagellar type III secretion system protein FliR from Pantoea sp. MT58

Subject, 258 a.a., flagellar biosynthetic protein FliR from Pseudomonas stutzeri RCH2

 Score =  187 bits (474), Expect = 2e-52
 Identities = 95/230 (41%), Positives = 151/230 (65%), Gaps = 2/230 (0%)

Query: 1   MITLDSSQLVHWVSQFFWPLVRIMALFATAPILNERSISKRVKIGLAVMITWLVMPLLPA 60
           M+ L ++Q+  WV QF  PL RI AL  + PI+  + +  RV++ LA+ I  +++P LP 
Sbjct: 1   MLELSNAQIGGWVGQFLLPLFRIAALLMSMPIIGTQLVPVRVRLYLALAIALVLVPTLPP 60

Query: 61  VNVT-LFSPPGFLLLIQQMLIGIALGFTMQFAFAAVRLAGEVIGLQMGISFATFFDPGSR 119
           + V    S    LL+ +Q+LIG+ LGF +Q  F    ++G+++ +QMG+ FA+  DP + 
Sbjct: 61  MPVVESLSLASLLLIAEQLLIGVMLGFVLQLFFHVFIVSGQMLAMQMGLGFASMVDPANG 120

Query: 120 LNMPVLARFLDMLAMLLFLSFNGHLWLISLLVDSFHTLPIGGEPINANAFMALVKSGGLI 179
           +++PVL +F +ML +LLFLS NGHL ++ +L +SF TLP+GG  ++ N F  +    G +
Sbjct: 121 ISVPVLGQFFNMLVILLFLSVNGHLVVLEILAESFVTLPVGG-GLSTNHFWEVAGKLGWV 179

Query: 180 FLNGMMLALPLIVLLLMVNLVLGLLNRVSPQLSIFAIGFPITLSVGILTI 229
              G++L LP I  LL+VNL  GL+ R +PQL+IF+IGFP+TL +G++ +
Sbjct: 180 LGAGLLLVLPAITALLVVNLAFGLMTRAAPQLNIFSIGFPLTLVLGLIIV 229