Pairwise Alignments

Query, 638 a.a., HAMP domain-containing protein from Pantoea sp. MT58

Subject, 554 a.a., methyl-accepting chemotaxis protein from Rahnella sp. WP5

 Score =  343 bits (879), Expect = 2e-98
 Identities = 216/468 (46%), Positives = 293/468 (62%), Gaps = 23/468 (4%)

Query: 194 FNEIKDGFSPLVSQLS--------GLADTSLGALLADVAQKTTSGTTLLNNYLQSVQVE- 244
           F+  K   S L   L+        GL D+S+  L+       T G T L +  +S   E 
Sbjct: 87  FDTAKQSLSGLTQALASFKAAPHPGLEDSSVQELITSWENLITQGVTPLFDAARSKNTES 146

Query: 245 --KRASDEMTAAAGKLNQSITDLAF-----FQSEQAQKYMHTALWQIGFATLVCITLSLL 297
             + A+  + A +     S+  ++      F + Q Q    T+  ++   T   I L +L
Sbjct: 147 YNQLANSTVPALSRSFGSSMEKVSGQIAVDFDAAQRQSTHLTSFSKVILLTAFGIGLVIL 206

Query: 298 IAWR--MTRSITVPLRETLSSAQRIAEGDLTAEITSSRTDELGELMTAMGAMNQSLRNII 355
           +     +  ++  PL +       IA GDLT  +     +  G+L+  +  M  SL N +
Sbjct: 207 LLTDRYLVMALVKPLDKIRGHFAVIASGDLTFYLEEFGKNCAGKLIPLLNEMQLSLVNTV 266

Query: 356 SRVRDGVNNVARASSEIAAGNTDLSSRTEQQSAAVVETAASMEELTSTVKLNAENAHHAS 415
             +R+  N++ + +SEI+AGN DLSSRTE+Q++A+ ETAASMEELT+TVK NA+NAHHAS
Sbjct: 267 QTIRNCTNHIYQGASEISAGNNDLSSRTEEQASALEETAASMEELTATVKHNADNAHHAS 326

Query: 416 QLATDASHNASCGGEIISEVITTMGGISQSSGKIGEIITVINGIAFQTNILALNAAVEAA 475
           QL  +AS  A  GG I+++V++TM  IS SS KI EI +VIN IAFQTNILALNAAVEAA
Sbjct: 327 QLVMEASTTAQKGGNIVADVVSTMKDISGSSKKIAEITSVINSIAFQTNILALNAAVEAA 386

Query: 476 RAGEQGRGFAVVAGEVRNLAQRSSLAAKEIEVLIRESLDRVSNGTELVNRAGVTMEGIVR 535
           RAGEQGRGFAVVA EVRNLAQRS+ AAKEIE LI ES+ RV +G++LV  AG TM  +VR
Sbjct: 387 RAGEQGRGFAVVASEVRNLAQRSAQAAKEIEQLISESVSRVDSGSKLVENAGQTMNEVVR 446

Query: 536 SVTQVRDIMGEIAAASDEQNRGITQIAQAMTEMDSTTQQNAALVEESSAAASSLEEQALE 595
           S+T V DIM EIA+ASDEQ++GI+Q+A A+TEMDS TQQNAALVE++S AA SLEEQA  
Sbjct: 447 SITHVTDIMAEIASASDEQSKGISQVAVAVTEMDSVTQQNAALVEQASQAAVSLEEQASL 506

Query: 596 LEKTVSVFRVP---SSGAFTPRAQTTRRNVQPSVSLMASKA--NWETF 638
           L   V+ F++    +S    P    +   ++P  S++++K+  NWETF
Sbjct: 507 LNNAVATFKLKDSVTSVGSRPAKSISAPLLRPDTSMLSAKSAENWETF 554