Pairwise Alignments

Query, 638 a.a., HAMP domain-containing protein from Pantoea sp. MT58

Subject, 544 a.a., methyl-accepting chemotaxis protein from Herbaspirillum seropedicae SmR1

 Score =  345 bits (885), Expect = 3e-99
 Identities = 209/387 (54%), Positives = 275/387 (71%), Gaps = 10/387 (2%)

Query: 220 LADVAQKTTSGTTLLNNYLQSVQVEKRASDEMTAAAGKLNQSITDLAFFQSEQAQKYMHT 279
           LA+  Q   +   L NN     ++ K A  E+ A   K++Q+    A  Q   A   +H 
Sbjct: 133 LANAGQWNEARALLANNQPVIDRLNK-AMTELRAYNEKISQAGAHRA--QETMAAARLHA 189

Query: 280 ALWQIGFATLVCITL-SLLIAWRMTRSITVPLRETLSSAQRIAEGDLTAEITSSRTDELG 338
            L  I  A +  +TL  LLIA ++ RS    L E +  A+ IAEGDLT EI +S TDE+G
Sbjct: 190 IL--ISAAVIAVVTLMGLLIARKIARS----LAEAVELAETIAEGDLTREIDTSSTDEIG 243

Query: 339 ELMTAMGAMNQSLRNIISRVRDGVNNVARASSEIAAGNTDLSSRTEQQSAAVVETAASME 398
            LM AM  MN++L  I++ VR GVN VA ASS+IA GN DLS+RTEQQ++++ +TAA+ E
Sbjct: 244 HLMAAMAKMNRNLVTIVATVRTGVNTVAAASSQIATGNMDLSARTEQQASSLEQTAAATE 303

Query: 399 ELTSTVKLNAENAHHASQLATDASHNASCGGEIISEVITTMGGISQSSGKIGEIITVING 458
           ELTSTVK NAENA  A QLA+ AS  A+ GGE++ +V+TTM  I  SS  I +II+VI+G
Sbjct: 304 ELTSTVKQNAENALQADQLASAASGIAAEGGEVVKQVVTTMEEIRSSSLNIADIISVIDG 363

Query: 459 IAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLAQRSSLAAKEIEVLIRESLDRVSN 518
           IAFQTNILALNAAVEAARAGEQGRGFAVVA EVR+LAQRS+ AAKEI+ LI +S+ +V N
Sbjct: 364 IAFQTNILALNAAVEAARAGEQGRGFAVVATEVRSLAQRSASAAKEIKQLIDDSVSKVEN 423

Query: 519 GTELVNRAGVTMEGIVRSVTQVRDIMGEIAAASDEQNRGITQIAQAMTEMDSTTQQNAAL 578
           G++LV  AG TM+ +V SV +V D++ EI+AAS EQ+ GI Q+ QA++ MD +TQ+NAAL
Sbjct: 424 GSQLVMSAGNTMQQVVESVRRVTDVVTEISAASREQSLGIEQVNQAISHMDQSTQENAAL 483

Query: 579 VEESSAAASSLEEQALELEKTVSVFRV 605
           VEE++AAA SL+EQA +LE+ V+VF++
Sbjct: 484 VEEATAAAQSLQEQARQLERAVNVFKL 510