Pairwise Alignments

Query, 494 a.a., sugar ABC transporter ATP-binding protein from Pantoea sp. MT58

Subject, 503 a.a., ribose import ATP-binding protein RbsA from Phaeobacter inhibens DSM 17395

 Score =  454 bits (1168), Expect = e-132
 Identities = 237/490 (48%), Positives = 334/490 (68%), Gaps = 4/490 (0%)

Query: 6   LEAEGISKFFPGVKALDNVSLRVRPGTVHALMGENGAGKSTLMKCLIGMYRPDKGTIKIK 65
           L  EGI K FPGV+ALD VSL + PG VHALMGENGAGKSTLMK L G+++PD+G I + 
Sbjct: 8   LRLEGIVKTFPGVRALDGVSLTILPGEVHALMGENGAGKSTLMKVLGGIHQPDEGQIIVA 67

Query: 66  GEPVQFQDTMDALRSGISMIHQELNLVPYMTVAENIWLGREPMK-FGFVDHARLNQKTQE 124
            +PV     +DA   GI  IHQEL+L   ++VAENI+LG  P K FG VD A L  KT  
Sbjct: 68  EQPVVMSGPLDAKAKGIVFIHQELSLADELSVAENIYLGELPRKRFGLVDWAELEAKTNA 127

Query: 125 LLNRLNIRLKAESMVGELSIASQQMVEIAKAVSWDSDIVIMDEPTSALTETEVAHLFTII 184
           +L +L +   A++ VG+LSIA+QQMVEIA+A++ D+  VI DEPT++LT+ E   LF +I
Sbjct: 128 ILEKLKVGFNAKTRVGDLSIANQQMVEIARALTVDAKAVIFDEPTASLTDAEKVVLFEVI 187

Query: 185 RDLREQGKAIIYISHKMDEIFNITDEVSIFRDGAWIASDETAKYTRQSLITQMVGRELTQ 244
            DL+EQG  I YISH+M+EIF ITD +S+ RDG +  +  TA+   +++   M+GR+L  
Sbjct: 188 SDLQEQGVGIAYISHRMEEIFKITDRISVLRDGQYQGTVNTAETNEENVTQMMIGRKLDL 247

Query: 245 LFPKFNSAIGEDVLTVRNLTCKDRFTDVSFNVRRGEILGVAGLVGAGRSEVMESLFGMES 304
              + +  +GE  L VR L+C   F DV+F VRRGE++G  GLVGAGR+E+ E+LFG+ +
Sbjct: 248 SRNEAHHELGEVALEVRGLSCGSLFEDVNFEVRRGEVVGFYGLVGAGRTEIAETLFGLRN 307

Query: 305 FDSGEILIDGVPVTIDSPSTAIEKGMAFLTEDRKKSGLFLVLSVMENMSIVNMPEYSGKS 364
             SG I +DG  V I SP  AIE+G++ + EDRK  GL L ++  +NM++  + +     
Sbjct: 308 PTSGSIFLDGAEVAITSPHDAIERGISLVPEDRKGQGLVLGMNCRDNMTLPQVDDLKAGP 367

Query: 365 GFVSHVKMAQDCMDQIR-RLNIKTPTMDQIINNLSGGNQQKVLIARWLLAQPKILILDEP 423
                 ++A    DQ R +L+I+TP   Q++ NLSGGNQQK++I +WL  +P +LI+DEP
Sbjct: 368 FVADGAEIA--IFDQYRDKLDIRTPGWKQLVGNLSGGNQQKIVIGKWLSMRPNVLIVDEP 425

Query: 424 TRGIDVGAKAEIYRLISELANRGVAIIMVSSELPEILGMSDRVMVMHGGRITGILDKEEA 483
           TRGIDVG+KAEI+ L+ +LA +G A+I++SSE+PE+L ++DR++ M+ GRI      EE 
Sbjct: 426 TRGIDVGSKAEIHNLLRDLAAQGYAVIVISSEMPEVLHVADRIVAMYSGRIMRTFTSEEV 485

Query: 484 DQETILSLAS 493
            +E +++  S
Sbjct: 486 TEENLIAAIS 495



 Score = 95.1 bits (235), Expect = 5e-24
 Identities = 70/241 (29%), Positives = 121/241 (50%), Gaps = 10/241 (4%)

Query: 5   ALEAEGISKFFPGVKALDNVSLRVRPGTVHALMGENGAGKSTLMKCLIGMYRPDKGTIKI 64
           ALE  G+S         ++V+  VR G V    G  GAG++ + + L G+  P  G+I +
Sbjct: 260 ALEVRGLSCG----SLFEDVNFEVRRGEVVGFYGLVGAGRTEIAETLFGLRNPTSGSIFL 315

Query: 65  KGEPVQFQDTMDALRSGISMIHQELN---LVPYMTVAENIWLGR-EPMKFG-FVDHARLN 119
            G  V      DA+  GIS++ ++     LV  M   +N+ L + + +K G FV      
Sbjct: 316 DGAEVAITSPHDAIERGISLVPEDRKGQGLVLGMNCRDNMTLPQVDDLKAGPFVADGAEI 375

Query: 120 QKTQELLNRLNIRLKA-ESMVGELSIASQQMVEIAKAVSWDSDIVIMDEPTSALTETEVA 178
               +  ++L+IR    + +VG LS  +QQ + I K +S   +++I+DEPT  +     A
Sbjct: 376 AIFDQYRDKLDIRTPGWKQLVGNLSGGNQQKIVIGKWLSMRPNVLIVDEPTRGIDVGSKA 435

Query: 179 HLFTIIRDLREQGKAIIYISHKMDEIFNITDEVSIFRDGAWIASDETAKYTRQSLITQMV 238
            +  ++RDL  QG A+I IS +M E+ ++ D +     G  + +  + + T ++LI  + 
Sbjct: 436 EIHNLLRDLAAQGYAVIVISSEMPEVLHVADRIVAMYSGRIMRTFTSEEVTEENLIAAIS 495

Query: 239 G 239
           G
Sbjct: 496 G 496