Pairwise Alignments

Query, 452 a.a., APC family permease from Pantoea sp. MT58

Subject, 443 a.a., amino acid permease (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  559 bits (1441), Expect = e-164
 Identities = 270/436 (61%), Positives = 341/436 (78%)

Query: 10  QRAQLKKTLTLLPVVMMGLAYMQPMTLFDTFGIVSGLTDGHVATAYAFALVAILFTAVSY 69
           Q+  LK++L L  VV+MGLAY+ PM +FDTFGIVS +T GHVAT+Y  AL  ILFTA SY
Sbjct: 4   QKPGLKQSLNLWQVVVMGLAYLTPMAVFDTFGIVSEITSGHVATSYLLALAGILFTAFSY 63

Query: 70  GKLVRRFPSAGSAYTYAQKAISPHVGFMVGWSSLLDYLFMPMINILLAKNYFESLVPGIP 129
           G LVR++P AGSAYTYAQK  SP+VGFMVGWSSLLDY+FMPMIN+LLAK Y  ++ P + 
Sbjct: 64  GHLVRKYPYAGSAYTYAQKNFSPNVGFMVGWSSLLDYMFMPMINMLLAKIYLTAMFPNVE 123

Query: 130 SWIFVVLLVGFMTLSNLKGIKTVANFNSVIVVLQVVVMVGITAMVIYGVASGVGSGTLVS 189
            WIF+  LV  MT+ NL+GI  VANFN VIV  Q+ +++    ++ + ++ G G G + S
Sbjct: 124 PWIFIFGLVTVMTVLNLRGIDLVANFNGVIVFAQIAIILVFIGLMAHSLSLGEGEGVIAS 183

Query: 190 SRPFWSENAHVVPMITGATILCFSFLGFDGISSLSEETKDAERTIPRAIFLTALIGGVIF 249
            RPF+SE   + P+ TGATILCFSFLGFDG+SSLSEETKDA+R IPRAI LTALIGGVIF
Sbjct: 184 VRPFYSEQVTLAPLFTGATILCFSFLGFDGLSSLSEETKDAKRVIPRAILLTALIGGVIF 243

Query: 250 IAASYFLQLYFPDITRFQHPDSSQPEIMLFVAGKALQVGILIFSVVTVLASGMAAHAGVS 309
           ++ SYFLQLYFPDI+RF+  D+  PEI L+V G   Q  +L+ + + VLASGMAAHAGV+
Sbjct: 244 VSVSYFLQLYFPDISRFEQLDAVLPEIALYVGGNLFQSIVLVATTIAVLASGMAAHAGVA 303

Query: 310 RLMYVMGRDGVFPERFFGYIHPKWRTPSLNVLLVGAIALMAINFDLVTATALINFGALVA 369
           R++YVMGRD + P + FGY+HPKWRTP+ NV+LVG +AL A++FDL  A AL+NFGALVA
Sbjct: 304 RILYVMGRDNMLPNKGFGYVHPKWRTPAFNVVLVGLLALSAVSFDLEMALALVNFGALVA 363

Query: 370 FTFVNLSVIAQFWVREKRNRTLKDHVQYLLLPLLGALTVGALWVNLEESSMELGLIWAAI 429
           FTFVNLSVI QF+++EKRN++LK+H+QY +LPL GA T+G LW+NLE  S+ELGLIW A+
Sbjct: 364 FTFVNLSVIVQFYIKEKRNQSLKEHLQYFVLPLCGAATIGVLWINLEPQSLELGLIWGAV 423

Query: 430 GIIYLAFVTRSFRNPV 445
           G++YLA  +   R  V
Sbjct: 424 GMLYLALRSLRLRKAV 439