Pairwise Alignments

Query, 550 a.a., multidrug ABC transporter permease/ATP-binding protein from Pantoea sp. MT58

Subject, 612 a.a., ABC transporter, ATP-binding/permease protein, putative (RefSeq) from Shewanella amazonensis SB2B

 Score =  112 bits (280), Expect = 4e-29
 Identities = 123/569 (21%), Positives = 235/569 (41%), Gaps = 54/569 (9%)

Query: 9   RQFRWPFIGVIALTLLSAVLGIGMIAFINREMIVAINTSFAVLPQ----------FLLQL 58
           R F  P I +  LT L A L + +  F+ + +   +N   A L Q           L+ +
Sbjct: 36  RGFEIPLISMSLLTALLAALEVSLFGFMGQLVDWLVNKDPATLLQDEGKTLLGMTLLVLV 95

Query: 59  VVLMAVTLASQLALTMLGHQFVWRLRGEFIKRILDSRVERIEQLGSAQLLAGLTSDVRAI 118
            + + V L + +A   L   +   +R    + +L   +   +   + ++   +     A+
Sbjct: 96  AIPLLVLLHALIAYQSLLGNYPMSIRWLAHRYLLKQSIGFYQNEFAGRIATKVMQSALAV 155

Query: 119 TLAFVRLPELFQGVIITLGSAIYLAWLSPKMLLVTSL-WLGVTLVGGWMLVSRVYQHMAK 177
               ++L ++   +++   S + +   S   L++  L WL   +   W  + R+ +   +
Sbjct: 156 RETVMKLLDVAVYILVYFTSMLVIIAQSDWRLMMPMLVWLCFYVALQWYFIPRLKRVSTE 215

Query: 178 LREIEDNL-------YRDYQTV---IEGRKELQLNRSRAQQVYDTVYQEDARAWRHHIVR 227
             +    +       Y +  TV      ++E    R       DTVY++        +V 
Sbjct: 216 QADARSTMTGRIVDSYTNISTVKLFSHTQREADYARDAMGSFLDTVYRQ------MRLVT 269

Query: 228 ADTYHLSAVNWSNIMTLGAIGMVFFMANSLGWANTAVAATFSLTLLFLRTPLLSAVGAL- 286
                +  +N+  +  + AI ++ +   ++     A+A + +L L  +   ++  V +L 
Sbjct: 270 GLNVSVQVINYMLVFAVAAIAILLWTEQAITIGAIAIAVSLALRLNGMSQWIMWEVSSLF 329

Query: 287 ---PTLLSAQVAFRKLNAFDLAPYQAGFHAPSASSDWQTLELRDVSFHYGDNGFQVGPIN 343
               T++       K    + AP        + +     +  +DVSFHYG+    +  + 
Sbjct: 330 ENIGTVVDGMNTLSKPTQIEDAPTAKALQVNNGA-----IHYKDVSFHYGEGSGVIDGLE 384

Query: 344 LTLRRGELVFLIGGNGSGKSTLAMLLTGLYQPQSGTLLLDGKAITADELDVWRSQFSAVF 403
           L +R GE V L+G +G+GKST+  LL   Y  + G +L+DG+ I     D  R+    V 
Sbjct: 385 LNIRPGEKVGLVGRSGAGKSTMVNLLMRFYDVERGEILIDGQPINEVTQDSLRAHIGMVT 444

Query: 404 TDLHLFDRLIGREGVAANPALVQQWLERL--KMQDKLKIE------GNKVLN-------L 448
            D  L  R I    +   P   +  L +   + Q +  IE      GN  L+       +
Sbjct: 445 QDTSLLHRTIRENILYGRPDATEDELNKAIDRAQAREFIEQLSDPSGNHGLDAMVGERGV 504

Query: 449 RLSKGQSKRLALLLAVAEERDVLLLDEWAADQDPHFRRIFYRELLPWLQQAGKTVFAISH 508
           +LS GQ +R+A+   + ++  +L+LDE  +  D          L   ++  GKTV AI+H
Sbjct: 505 KLSGGQRQRIAIARVLLKDAPILILDEATSALDSEVEAAIQESLYQLME--GKTVIAIAH 562

Query: 509 DDHYFIHADRLLEMREGQLTELTGNERDL 537
                   DRL+ + EG++ E  G+ ++L
Sbjct: 563 RLSTIAAMDRLIVLDEGKVVE-QGSHKEL 590