Pairwise Alignments

Query, 506 a.a., NADH-quinone oxidoreductase subunit M from Pantoea sp. MT58

Subject, 494 a.a., NADH dehydrogenase I, chain M (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  229 bits (585), Expect = 1e-64
 Identities = 146/418 (34%), Positives = 221/418 (52%), Gaps = 21/418 (5%)

Query: 71  WIPRFGISFHLAIDGLSLLMVVLTGLLGLMAVLCSWNEISKYQGFFHLNLMWILGGVIGV 130
           W     IS+ + +DG+S+ M++L+ ++       SW      + +F L    +  GV G 
Sbjct: 69  WYAPLHISYSVGVDGISVAMLLLSAVIVFTGTFASWRLQPLTKEYF-LWFTLLSMGVFGF 127

Query: 131 FLSIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRISAATKFFIYTQASGLVMLIAIL 190
           F+SID+F  F F+E+ L+PMY LI +WG    +      AA K  +        +LI IL
Sbjct: 128 FISIDLFTMFMFYEIALIPMYLLIGVWGSGRKE-----YAAMKLTLMLMGGSAFLLIGIL 182

Query: 191 GLVFVHYNATGVWTFNYEQLLKTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQ 250
           G+ F    AT +      QL   P +    +  +   F+ F V   + P H W PD H+ 
Sbjct: 183 GIYFGS-GATTMNLLEIAQLHNIPFAQQCIWFPLT--FLGFGVLGALFPFHTWSPDGHAS 239

Query: 251 APTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGIIGIFYGAWMAFSQTD 310
           APTA S+  AG+L+K   YG  R ++ L P A+ E + I + L  I + YGA+ A  QTD
Sbjct: 240 APTAVSMLHAGVLMKLGGYGCFRIAMYLMPEAANELSWIFLILTGISVVYGAFSACVQTD 299

Query: 311 IKRLIAYTSISHMGFVLIAIYTGSQLALQGAVIQMIAHGLSAAALFILCGQLYERLHTRD 370
           +K + AY+S+SH G VL AI   +Q A  GA++QM++HGL  A  F L G +Y R HTRD
Sbjct: 300 LKYINAYSSVSHCGLVLFAILMLNQTAATGAILQMLSHGLMTALFFALIGMIYGRTHTRD 359

Query: 371 MRQMGGLWSRIKWIPGLSLFFAV---ANLGMPGTGNFVGEFMILTGSFQVVPM----III 423
           +R++ GL   +K +P LS+ + +   ANLG+PG   F+ E  I  GSFQ   +    + I
Sbjct: 360 VRELTGL---MKVMPFLSVCYVIAGLANLGLPGLSGFIAEMTIFVGSFQNNDVFHRTLTI 416

Query: 424 IATFGLVFASIYSLVMMQRAYYGEAKSKD--PLPGMSPREFMTIGVLVVLLVLLGVYP 479
           IA   +V  ++Y L ++ +  YG   +K    L   +  E + +  L+V +  LG+ P
Sbjct: 417 IACSSIVITAVYILRLVGKILYGTCTNKHHLALTDATWDERVAVICLIVCVAGLGMAP 474