Pairwise Alignments

Query, 267 a.a., tRNA pseudouridine(38-40) synthase TruA from Pantoea sp. MT58

Subject, 278 a.a., Pseudouridylate synthase (NCBI) from Rhodospirillum rubrum S1H

 Score =  175 bits (443), Expect = 1e-48
 Identities = 107/257 (41%), Positives = 148/257 (57%), Gaps = 8/257 (3%)

Query: 11  LGIEYDGSRYYGWQRQNEVRSVQEKVERALSKVADHPVSIFCAGRTDAGVHGTGQVVHFE 70
           L +EYDG  Y GWQRQ+   ++Q+ +E A  ++      +  +GRTD+GVH  GQV H +
Sbjct: 6   LTVEYDGRGYCGWQRQDNGPTIQQSLEEAAFRLCGVATRVHGSGRTDSGVHALGQVAHLD 65

Query: 71  TTSQRPDGAWTL--GVNANLPPD-IAVRWVKAVPDEFHARFSATARRYRYLIYNQRLRPA 127
               R  GA T+   +NA+L P  IAV     V ++FHARFSA  R YRY I N R+ P 
Sbjct: 66  LP--RAYGAATVMKALNAHLRPQPIAVIDAAEVAEDFHARFSAEERSYRYRILN-RIAPP 122

Query: 128 VLAQG-VTHFYHPLDAEKMQRAGQCLLGENDFTSFRAVQCQSRTPWRNVIHLNVTRQGPY 186
            L QG V     P++A  M  A Q L+G +DF+SFRA +CQ+ +P + +  L VTR G  
Sbjct: 123 TLDQGRVWWVARPMEAAIMDEAAQVLVGRHDFSSFRAAECQADSPVKTLSELRVTRVGDE 182

Query: 187 VIVDIKANAFVHHMVRNIVGSLMEIGCGNKPESWMATLLAAKDRTLAAATARAEGLYLVA 246
           + V  +A +F+HH VRN+VG+L  +G G      +   L A DR+ A  TA  +GLY + 
Sbjct: 183 IHVFARARSFLHHQVRNMVGTLALVGDGRWTADRLRAALEACDRSAAGPTAPPDGLYFLR 242

Query: 247 VDYPSHFALPQPSMGPL 263
           V +P   A P  + GPL
Sbjct: 243 VRFPGETAAPAKA-GPL 258