Pairwise Alignments

Query, 267 a.a., tRNA pseudouridine(38-40) synthase TruA from Pantoea sp. MT58

Subject, 269 a.a., tRNA pseudouridine synthase A (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  138 bits (347), Expect = 1e-37
 Identities = 89/253 (35%), Positives = 130/253 (51%), Gaps = 17/253 (6%)

Query: 7   QKLALGIEYDGSRYYGWQRQNEVRSVQEKVERALSKVADHPVSIFCAGRTDAGVHGTGQV 66
           Q+  + + YDG+ Y+GWQ Q    SVQE + +ALS      V +  AGRTDAGVH +  V
Sbjct: 2   QRYFIYLAYDGTNYHGWQIQPNGSSVQECLMKALSTFLRRDVEVIGAGRTDAGVHASLMV 61

Query: 67  VHFETTSQRPDGAWTLGVNANLPPDIAVRWVKAVPDEFHARFSATARRYRYLI------Y 120
            HF+             +N  LPPDI+V  V+ V  + HARF ATAR Y+Y +      +
Sbjct: 62  AHFDHEDVLDTVTVADKLNRLLPPDISVYRVRQVKPDAHARFDATARTYKYYVTTAKYPF 121

Query: 121 NQRLRPAVLAQGVTHFYHPLDAEKMQRAGQCLLGENDFTSFRAVQCQSRTPWRNVIHLNV 180
           N++ R  V        Y  LD E+M  A + L    DFTSF  +    +T   ++ H   
Sbjct: 122 NRQYRYRV--------YGSLDYERMNEAARTLFEYIDFTSFSKLHTDVKTNICHISHAEW 173

Query: 181 TR---QGPYVIVDIKANAFVHHMVRNIVGSLMEIGCGNKPESWMATLLAAKDRTLAAATA 237
           T+   +    +  I+A+ F+ +MVR IVG+L+E+G G         ++  +DR  A  +A
Sbjct: 174 TKMEGEDTTWVFTIRADRFLRNMVRAIVGTLLEVGRGKLTVEGFRKVIEQQDRCKAGTSA 233

Query: 238 RAEGLYLVAVDYP 250
               L+LV V+YP
Sbjct: 234 PGNALFLVNVEYP 246