Pairwise Alignments

Query, 267 a.a., tRNA pseudouridine(38-40) synthase TruA from Pantoea sp. MT58

Subject, 261 a.a., tRNA pseudouridine synthase A (RefSeq) from Shewanella sp. ANA-3

 Score =  373 bits (958), Expect = e-108
 Identities = 179/260 (68%), Positives = 212/260 (81%)

Query: 8   KLALGIEYDGSRYYGWQRQNEVRSVQEKVERALSKVADHPVSIFCAGRTDAGVHGTGQVV 67
           ++ALGIEYDGS Y+GWQRQ EV SVQ ++E+ALSKVA+ P+S+FCAGRTDAGVH TGQVV
Sbjct: 2   RIALGIEYDGSGYFGWQRQAEVDSVQGQLEQALSKVANEPISLFCAGRTDAGVHATGQVV 61

Query: 68  HFETTSQRPDGAWTLGVNANLPPDIAVRWVKAVPDEFHARFSATARRYRYLIYNQRLRPA 127
           HFET + R +GAWTLGVNANLP +IAVRW K V D FHARFSATARRYRY+IYN   RP 
Sbjct: 62  HFETNAIRNEGAWTLGVNANLPDNIAVRWAKEVDDTFHARFSATARRYRYVIYNHNFRPG 121

Query: 128 VLAQGVTHFYHPLDAEKMQRAGQCLLGENDFTSFRAVQCQSRTPWRNVIHLNVTRQGPYV 187
           +L  GV+H++  +D +KM  A Q LLGE DFTSFRA+QCQS+TP+RNV  + VTRQG YV
Sbjct: 122 ILRHGVSHYHGDIDTDKMHVAAQALLGEQDFTSFRAIQCQSKTPFRNVHSVKVTRQGMYV 181

Query: 188 IVDIKANAFVHHMVRNIVGSLMEIGCGNKPESWMATLLAAKDRTLAAATARAEGLYLVAV 247
           IVDI ANAF+HHMVRNIVGSL+EIG GN+P +WMA LLA KDR  AAATA+  GLYLV V
Sbjct: 182 IVDISANAFLHHMVRNIVGSLLEIGLGNQPLTWMADLLALKDRNQAAATAKPNGLYLVDV 241

Query: 248 DYPSHFALPQPSMGPLFLAD 267
            YP  + LP+ ++GPLF+ D
Sbjct: 242 TYPEQYQLPKLALGPLFMLD 261