Pairwise Alignments

Query, 182 a.a., endonuclease SmrB from Pantoea sp. MT58

Subject, 220 a.a., DNA mismatch repair protein MutS from Herbaspirillum seropedicae SmR1

 Score = 79.7 bits (195), Expect = 3e-20
 Identities = 54/143 (37%), Positives = 73/143 (51%), Gaps = 8/143 (5%)

Query: 41  IPVKRLLSEQADNSHYFSDEF--QPLLSTEGATRYVRADVSHFELKKLRRGDYTPEIFLD 98
           IP + L  EQA      SDEF    L+ ++    + R  V    L KLRRG++  +  LD
Sbjct: 76  IPRQHLADEQAALLESLSDEFTIDTLMDSDENLSFARPGVGMDVLSKLRRGNWVIQAQLD 135

Query: 99  LHGLTQQQAKQELGALIAACRREHLFCASVMTGHG------KHILKQQTPLWLAQHPWVM 152
           LHG  + QA++ LG  +   RR  L C  V+ G G      + +LK +   WLAQ   VM
Sbjct: 136 LHGYRRDQAREALGEFLRQSRRRGLRCVRVIHGKGLGSVNKEPVLKHKVRNWLAQKDEVM 195

Query: 153 AFHQAPKMFGGDAALLVLIEIEE 175
           AF QA    GG  AL+VL++  E
Sbjct: 196 AFCQARAADGGAGALVVLLKSSE 218