Pairwise Alignments

Query, 672 a.a., NAD-dependent DNA ligase LigA from Pantoea sp. MT58

Subject, 669 a.a., DNA ligase, NAD-dependent (RefSeq) from Shewanella loihica PV-4

 Score =  797 bits (2059), Expect = 0.0
 Identities = 406/674 (60%), Positives = 509/674 (75%), Gaps = 7/674 (1%)

Query: 1   MKSVQDHITELRTTLRHHEYLYHVMDAPEVPDAEYDRLMRELRQLEEEHPDLITPDSPTQ 60
           M+++QD I +L   L  H Y Y+V DAP +PDAEYDRLMR L++LE EHP+L   DSPTQ
Sbjct: 1   MQAIQDEIKQLTDELNQHNYRYYVDDAPSIPDAEYDRLMRRLQELEAEHPELALADSPTQ 60

Query: 61  RVGAAPLTVFEQVRHEVPMLSLDNAFDEATFMAFNKRVQDRLKNSEDITYCCELKLDGAA 120
           RVG   L+ F QV H  PMLSLDN F E  F AF KRV D+L ++    +CCE KLDG A
Sbjct: 61  RVGGEALSKFNQVTHLKPMLSLDNVFSEEEFNAFYKRVGDKLPDTP--AFCCEPKLDGLA 118

Query: 121 VSLMYENGLLVQAATRGDGTTGENITANVRTIRAIPLRLKGDNIPARLEVRGEVFMTQRG 180
           VS++Y +G+  +AATRGDGT GE+IT NVRTI+++PLRL+G   P  LEVRGEVFM +  
Sbjct: 119 VSILYRDGVFERAATRGDGTVGEDITENVRTIKSVPLRLRGSGFPPLLEVRGEVFMPKAA 178

Query: 181 FEKLNEEARRTDGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGFGLLEGGEMP--HS 238
           FE +N++AR    K+F NPRNAAAGSLRQLD +ITA R L F+ Y  G++E    P   S
Sbjct: 179 FEAVNDKARAKGEKLFVNPRNAAAGSLRQLDSKITASRSLAFYAYALGVVEPETWPLAAS 238

Query: 239 HMARLQQFKAWGLPVSDRIKRVHNAEEALAFYREIEQQRPNLGFDIDGVVIKVDSQALQE 298
           H  +L Q K WG PVS  +K   +    LA+Y++I  +R  L ++IDGVV+KV+  A Q+
Sbjct: 239 HFEQLVQLKEWGCPVSSEVKVCADIPSVLAYYQDILTRRSELAYEIDGVVLKVNDIAQQQ 298

Query: 299 QLGFVARAPRWAIAFKFPAQEQLTWVRDVEFQVGRTGAITPVARLEPVQVAGVIVSNATL 358
            LGFVA+APRWA A+KFPAQE++T +  V+FQVGRTGA+TPVARL+PV V GV VSNATL
Sbjct: 299 TLGFVAKAPRWATAYKFPAQEEITQLEGVDFQVGRTGAVTPVARLQPVFVGGVTVSNATL 358

Query: 359 HNADEIERLGLRIGDRVVIRRAGDVIPQVVNVVIAERPEETREVVFPAHCPVCGSEVERV 418
           HNADEI RLG+ IGD V+IRRAGDVIPQVV VV  +RP + + + FP  CPVCGS+VERV
Sbjct: 359 HNADEIARLGVMIGDSVIIRRAGDVIPQVVAVVPEKRPSDAQAIQFPPQCPVCGSDVERV 418

Query: 419 EGESVTRCTGGLICGAQRKEALKHFVSRRALDVDGMGDKIIDQLVEKEYVSTPADLFRLT 478
           EGE+V RCTGGL+C AQRKEA+KHF SR+ALD+DGMGDK+++QL++KE V++PADLF+LT
Sbjct: 419 EGEAVARCTGGLVCEAQRKEAIKHFASRKALDIDGMGDKVVEQLIDKELVASPADLFKLT 478

Query: 479 AGKLTGLDRMGPKSAQNVVDALEKAKSTTLARFLYALGIREVGEATAANLANHFGELQKV 538
           A  +T LDRMG KSA N+V+ALE AK TT ARFLY+LGIREVGEATAANLAN+F  L+ +
Sbjct: 479 ASAITMLDRMGMKSATNLVNALEAAKQTTFARFLYSLGIREVGEATAANLANYFKTLEHL 538

Query: 539 MDADLEALIAVPDVGKVVATHVRNFMEEESNREVIRQLTEEIGIHWPQVVVVKAEEIDSP 598
             AD E  + V DVG +VA H+ +F E+  N EVI  L  + G+HWP +  V  E +   
Sbjct: 539 KQADAETFMKVDDVGVIVAQHLVHFFEQPHNLEVIDGLL-QAGVHWPDIEEVAEEALS-- 595

Query: 599 FAGKTVVLTGSLSQMNRDDAKAQLVALGAKVSGSVSKKTDLLIAGEAAGSKLAKAQELGI 658
             G+T VLTG+L+Q+NR+DAKA+L ALGAKV+GSVSK TD L+AGEAAGSKL KAQELG+
Sbjct: 596 LKGQTWVLTGTLTQLNRNDAKAKLQALGAKVAGSVSKNTDCLVAGEAAGSKLTKAQELGV 655

Query: 659 EVIDEAEMIRLLGA 672
           +VIDEAE++ +LG+
Sbjct: 656 KVIDEAELLAILGS 669